R-Syst::diatom: an open-access and curated barcode database for diatoms and freshwater monitoring (Q30489110)

15 August 2017

R-Syst::diatom: an open-access and curated barcode database for diatoms and freshwater monitoring (English)

1 reference

15 August 2017

0 references

François Keck

3

0 references

Valentin Vasselon

object named as

Valentin Vasselon

5

0 references

Maria Kahlert

object named as

Maria Kahlert

6

0 references

Frédéric Rimet

1

object named as

Frédéric Rimet

1 reference

15 August 2017

8

Agnès Bouchez

1 reference

15 August 2017

Philippe Chaumeil

2

1 reference

15 August 2017

Lenaïg Kermarrec

4

1 reference

15 August 2017

Alain Franc

7

1 reference

15 August 2017

17 March 2016

1 reference

15 August 2017

1 reference

15 August 2017

2016

1 reference

Dissecting signal and noise in diatom chloroplast protein encoding genes with phylogenetic information profiling

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Taxonomic reference libraries for environmental barcoding: a best practice example from diatom research

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

When is sampling complete? The effects of geographical range and marker choice on perceived diversity in Nitzschia palea (Bacillariophyta).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Does the cosmopolitan diatom Gomphonema parvulum (Kützing) Kützing have a biogeography?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

First evidence of the existence of semi-cryptic species and of a phylogeographic structure in the Gomphonema parvulum (Kützing) Kützing complex (Bacillariophyta).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

An inordinate fondness? The number, distributions, and origins of diatom species.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Molecular subdivision of the marine diatom Thalassiosira rotula in relation to geographic distribution, genome size, and physiology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Distance and character-based evaluation of the V4 region of the 18S rRNA gene for the identification of diatoms (Bacillariophyceae)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Global diversity and biogeography of Skeletonema species (bacillariophyta).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Biological identifications through DNA barcodes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Identification of common molecular subsequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4795936

Ecological assessments with algae: a review and synthesis

20 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Barcoding diatoms: Is there a good marker?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

An assessment of potential diatom "barcode" genes (cox1, rbcL, 18S and ITS rDNA) and their effectiveness in determining relationships in Sellaphora (Bacillariophyta).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Barcoding diatoms: exploring alternatives to COI-5P.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Graph drawing by force-directed placement

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Linking diatom sensitivity to herbicides to phylogeny: a step forward for biomonitoring?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Survey of the efficacy of a short fragment of the rbcL gene as a supplemental DNA barcode for diatoms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Evolution of the diatoms: V. Morphological and cytological support for the major clades and a taxonomic revision

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Bridging the Rubicon: phylogenetic analysis reveals repeated colonizations of marine and fresh waters by thalassiosiroid diatoms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Perceptions and experiences of research participants on gender-based violence community based survey: implications for ethical guidelines

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

A selected core microbiome drives the early stages of three popular italian cheese manufactures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Highly differentiated populations of the freshwater diatom Sellaphora capitata suggest limited dispersal and opportunities for allopatric speciation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

A MOLECULAR SYSTEMATIC APPROACH TO EXPLORE DIVERSITY WITHIN THE SELLAPHORA PUPULA SPECIES COMPLEX (BACILLARIOPHYTA)(1).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

CRYPTIC AND PSEUDO-CRYPTIC DIVERSITY IN DIATOMS-WITH DESCRIPTIONS OF PSEUDO-NITZSCHIA HASLEANA SP. NOV. AND P. FRYXELLIANA SP. NOV.(1).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Phylogeny of six naviculoid diatoms based on 18S rDNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

A time-calibrated multi-gene phylogeny of the diatom genus Pinnularia

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

Morphology and identity of some ecologically important smallNitzschiaspecies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW016

[Phylogenetic position of the diatomic algae species Aulacoseira from Lake Baikal from results of comparing nucleotide sequences of segments of the 19S rRNA gene]

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26989149

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/DATABASE/BAW016

1 reference

journals/biodb/RimetCKKVKFB16

15 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

15 August 2017

PubMed publication ID

26989149

1 reference