Identification of differential translation in genome wide studies (Q30497672)

28 September 2017

Identification of differential translation in genome wide studies (English)

1 reference

28 September 2017

2

Nahum Sonenberg

1 reference

28 September 2017

Ola Larsson

1

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author name string

Robert Nadon

series ordinal

3

1 reference

PMCID

3003104

28 September 2017

language of work or name

English

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publication date

29 November 2010

1 reference

Proceedings of the National Academy of Sciences of the United States of America

28 September 2017

1 reference

28 September 2017

107

1 reference

28 September 2017

50

1 reference

28 September 2017

21487-21492

1 reference

Gene expression - time to change point of view?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Ribosomal protein mRNAs are translationally-regulated during human dendritic cells activation by LPS.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Eukaryotic initiation factor 4E binding protein family of proteins: sentinels at a translational control checkpoint in lung tumor defense

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

4E-BP extends lifespan upon dietary restriction by enhancing mitochondrial activity in Drosophila

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Essential role for eIF4GI overexpression in the pathogenesis of inflammatory breast cancer.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

eIF2alpha kinases GCN2 and PERK modulate transcription and translation of distinct sets of mRNAs in mouse liver

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Discovering structural cis-regulatory elements by modeling the behaviors of mRNAs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Global and gene-specific translational regulation in rat lung development

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

NCBI GEO: archive for high-throughput functional genomic data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Fibrotic myofibroblasts manifest genome-wide derangements of translational control

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

An approach to analyse the specific impact of rapamycin on mRNA-ribosome association

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

eIF4GI links nutrient sensing by mTOR to cell proliferation and inhibition of autophagy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Genome-wide identification and characterization of transcripts translationally regulated by bacterial lipopolysaccharide in macrophage-like J774.1 cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Translational control plays a prominent role in the hepatocytic differentiation of HepaRG liver progenitor cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Eukaryotic translation initiation factor 4E induced progression of primary human mammary epithelial cells along the cancer pathway is associated with targeted translational deregulation of oncogenic drivers and inhibitors

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

RNA regulons: coordination of post-transcriptional events

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Mammalian target of rapamycin activation impairs hepatocytic differentiation and targets genes moderating lipid homeostasis and hepatocellular growth

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Improved precision and accuracy for microarrays using updated probe set definitions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

The cap-dependent translation apparatus integrates and amplifies cancer pathways

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Expression profiling reveals meiotic male germ cell mRNAs that are translationally up- and down-regulated

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Messenger RNAs under differential translational control in Ki-ras-transformed cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Microarray data analysis: from disarray to consolidation and consensus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Dissecting eukaryotic translation and its control by ribosome density mapping

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

Summaries of Affymetrix GeneChip probe level data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

The second Sir Hans Krebs Lecture. Informosomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003104

p53-dependent translational control of senescence and transformation via 4E-BPs.

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006821107

Radiation-induced changes in gene expression involve recruitment of existing messenger RNAs to and away from polysomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006821107

Response of rat muscle to acute resistance exercise defined by transcriptional and translational profiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006821107

Oncogenic Ras and Akt Signaling Contribute to Glioblastoma Formation by Differential Recruitment of Existing mRNAs to Polysomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006821107

Igbp1 is part of a positive feedback loop in stem cell factor-dependent, selective mRNA translation initiation inhibiting erythroid differentiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006821107

A random variance model for detection of differential gene expression in small microarray experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006821107

Regulatory element identification in subsets of transcripts: comparison and integration of current computational methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006821107

A hierarchical network controls protein translation during murine embryonic stem cell self-renewal and differentiation

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21115840

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Analysis of partial variance (APV) as a statistical approach to control day to day variation in immune assays

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21115840

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1006821107

1 reference

28 September 2017

0 references

1 reference

28 September 2017

1 reference

PMCID

3003104