Identification of hot-spot residues in protein-protein interactions by computational docking (Q30849432)

17 November 2017

Identification of hot-spot residues in protein-protein interactions by computational docking (English)

1 reference

protein-protein interaction

17 November 2017

computational biology

1 reference

based on heuristic

inferred from title

1 reference

2

1 reference

17 November 2017

Solène Grosdidier

1

1 reference

17 November 2017

21 October 2008

1 reference

17 November 2017

1 reference

17 November 2017

9

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17 November 2017

447

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Creative Commons Attribution 2.0 Generic

17 November 2017

start time

21 October 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-9-447

0 references

cites work

Protein-protein interaction hotspots carved into sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

Identification of hot spot residues at protein-protein interface

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

Hot spots--a review of the protein-protein interface determinant amino-acid residues

21 June 2018

1 reference

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Computational identification of inhibitors of protein-protein interactions.

21 June 2018

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Probing the effect of point mutations at protein-protein interfaces with free energy calculations

21 June 2018

1 reference

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Small-molecule inhibitors of protein-protein interactions: progressing towards the dream

21 June 2018

1 reference

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21 June 2018

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Protein-protein interactions: structurally conserved residues distinguish between binding sites and exposed protein surfaces

21 June 2018

1 reference

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A simple physical model for binding energy hot spots in protein-protein complexes

21 June 2018

1 reference

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Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations

21 June 2018

1 reference

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Inhibition of protein-protein association by small molecules: approaches and progress

21 June 2018

1 reference

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Unraveling hot spots in binding interfaces: progress and challenges

21 June 2018

1 reference

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Conservation of polar residues as hot spots at protein interfaces

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

The atomic structure of protein-protein recognition sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

Anatomy of hot spots in protein interfaces

21 June 2018

1 reference

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Neutralizing epitopes on the extracellular interferon gamma receptor (IFNgammaR) alpha-chain characterized by homolog scanning mutagenesis and X-ray crystal structure of the A6 fab-IFNgammaR1-108 complex

21 June 2018

1 reference

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Analysis of protein-protein interaction sites using surface patches

21 June 2018

1 reference

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Modelling protein docking using shape complementarity, electrostatics and biochemical information

21 June 2018

1 reference

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Principles of protein-protein interactions

21 June 2018

1 reference

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pyDock: electrostatics and desolvation for effective scoring of rigid-body protein-protein docking

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

Computational alanine scanning mutagenesis--an improved methodological approach

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

Hot regions in protein--protein interactions: the organization and contribution of structurally conserved hot spot residues

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

Optimal docking area: a new method for predicting protein-protein interaction sites

25 November 2018

1 reference

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ProMate: a structure based prediction program to identify the location of protein-protein binding sites

25 November 2018

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Computational alanine scanning of protein-protein interfaces

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

Identification of protein-protein interaction sites from docking energy landscapes.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

A novel shape complementarity scoring function for protein‐protein docking

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

ASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

High resolution mapping of the binding site on human IgG1 for Fc gamma RI, Fc gamma RII, Fc gamma RIII, and FcRn and design of IgG1 variants with improved binding to the Fc gamma R.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2579439

An automated decision-tree approach to predicting protein interaction hot spots

25 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18939967

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mechanism of folding and assembly of a small tetrameric protein domain from tumor suppressor p53

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18939967

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-9-447

1 reference

journals/bmcbi/GrosdidierF08

17 November 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

17 November 2017

1 reference

PMCID

2579439