Promoter use by sigma 38 (rpoS) RNA polymerase. Amino acid clusters for DNA binding and isomerization (Q30857380)

27 June 2017

Promoter use by sigma 38 (rpoS) RNA polymerase. Amino acid clusters for DNA binding and isomerization (English)

1 reference

27 June 2017

Shun Jin Lee

1

1 reference

PubMed ID

12351645

27 June 2017

Jay D Gralla

series ordinal

2

1 reference

PubMed ID

12351645

27 June 2017

language of work or name

English

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publication date

25 September 2002

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Journal of Biological Chemistry

27 June 2017

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27 June 2017

277

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27 June 2017

49

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27 June 2017

47420-47427

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Interplay of global regulators and cell physiology in the general stress response of Escherichia coli

27 June 2017

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

The sigma 70 family: sequence conservation and evolutionary relationships

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Sigma38 (rpoS) RNA polymerase promoter engagement via -10 region nucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

What makes an Escherichia coli promoter sigma(S) dependent? Role of the -13/-14 nucleotide promoter positions and region 2.5 of sigma(S).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Function of the bacterial TATAAT -10 element as single-stranded DNA during RNA polymerase isomerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Interplay between global regulators of Escherichia coli: effect of RpoS, Lrp and H-NS on transcription of the gene osmC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

sigma factor selectivity of Escherichia coli RNA polymerase: role for CRP, IHF and lrp transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Changes in the linking number of supercoiled DNA accompany growth transitions in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Promoter selectivity of Escherichia coli RNA polymerase E sigma 70 and E sigma 38 holoenzymes. Effect of DNA supercoiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Stimulatory effect of trehalose on formation and activity of Escherichia coli RNA polymerase E sigma38 holoenzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

A carboxy-terminal 16-amino-acid region of sigma(38) of Escherichia coli is important for transcription under high-salt conditions and sigma activities in vivo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Escherichia coli promoter opening and -10 recognition: mutational analysis of sigma70.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Different roles for basic and aromatic amino acids in conserved region 2 of Escherichia coli sigma(70) in the nucleation and maintenance of the single-stranded DNA bubble in open RNA polymerase-promoter complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Promoter opening via a DNA fork junction binding activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Fis activates the RpoS-dependent stationary-phase expression of proP in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

aldB, an RpoS-dependent gene in Escherichia coli encoding an aldehyde dehydrogenase that is repressed by Fis and activated by Crp.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Two amino acids in an RNA polymerase sigma factor involved in the recognition of adjacent base pairs in the -10 region of a cognate promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Open complex formation by Escherichia coli RNA polymerase: the mechanism of polymerase-induced strand separation of double helical DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Probing the informational content of Escherichia coli sigma 70 region 2.3 by combinatorial cassette mutagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

A promoter melting region in the primary sigma factor of Bacillus subtilis. Identification of functionally important aromatic amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Characterization of the sigma 38-dependent expression of a core Escherichia coli starvation gene, pexB.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

DNA-binding determinants of sigma 54 as deduced from libraries of mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Promoter recognition as measured by binding of polymerase to nontemplate strand oligonucleotide

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Regulation of RpoS proteolysis in Escherichia coli: the response regulator RssB is a recognition factor that interacts with the turnover element in RpoS

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

The interface of sigma with core RNA polymerase is extensive, conserved, and functionally specialized

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Promoter recognition and discrimination by EsigmaS RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

Promoter selectivity control of Escherichia coli RNA polymerase by ionic strength: differential recognition of osmoregulated promoters by E sigma D and E sigma S holoenzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208363200

21 January 2018

Identifiers

DOI

10.1074/JBC.M208363200

1 reference

27 June 2017

1 reference

PubMed ID

12351645