Classification of ncRNAs using position and size information in deep sequencing data (Q33686647)

28 July 2017

title

Classification of ncRNAs using position and size information in deep sequencing data (English)

1 reference

28 July 2017

2

Ralf Zimmer

1 reference

28 July 2017

Florian Erhard

1

1 reference

28 July 2017

language of work or name

English

0 references

publication date

1 September 2010

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28 July 2017

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28 July 2017

volume

26

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28 July 2017

issue

18

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28 July 2017

page(s)

i426-32

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Human tRNA-derived small RNAs in the global regulation of RNA silencing

28 July 2017

cites work

1 reference

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21 June 2018

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Characterization of viral and human RNAs smaller than canonical MicroRNAs

21 June 2018

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Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development

21 June 2018

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21 June 2018

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A distinct class of small RNAs arises from pre-miRNA-proximal regions in a simple chordate

21 June 2018

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21 June 2018

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Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs

21 June 2018

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An endogenous small interfering RNA pathway in Drosophila

21 June 2018

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Discovering microRNAs from deep sequencing data using miRDeep

21 June 2018

1 reference

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Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

21 June 2018

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21 June 2018

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MicroRNA targeting specificity in mammals: determinants beyond seed pairing

21 June 2018

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Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering

21 June 2018

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Prediction and validation of microRNAs and their targets

21 June 2018

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Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction

21 June 2018

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Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction

21 June 2018

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MicroRNAs: genomics, biogenesis, mechanism, and function

21 June 2018

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The expanding snoRNA world

21 June 2018

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Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline

21 June 2018

1 reference

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Identification of common molecular subsequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2935403

Structural determinants of RNA recognition and cleavage by Dicer

21 June 2018

1 reference

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Prediction of locally stable RNA secondary structures for genome-wide surveys

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2935403

A simple iterative approach to parameter optimization.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2935403

An improved algorithm for matching biological sequences.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2935403

High throughput sequencing of microRNAs in chicken somites

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2935403

Stressing out over tRNA cleavage

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20823303

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTQ363

1 reference

journals/bioinformatics/ErhardZ10

28 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_g7fku24ijzhudkhlizfqjiv4ya

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/g7fku24ijzhudkhlizfqjiv4ya

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

2935403

1 reference

28 July 2017

1 reference