RAId_aPS: MS/MS analysis with multiple scoring functions and spectrum-specific statistics (Q33754694)

29 July 2017

title

RAId_aPS: MS/MS analysis with multiple scoring functions and spectrum-specific statistics (English)

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29 July 2017

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Gelio Alves

1

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29 July 2017

Aleksey Y Ogurtsov

series ordinal

2

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29 July 2017

Yi-Kuo Yu

series ordinal

3

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29 July 2017

language of work or name

English

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publication date

16 November 2010

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29 July 2017

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29 July 2017

volume

5

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29 July 2017

issue

11

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29 July 2017

page(s)

e15438

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Creative Commons CC0 License

29 July 2017

copyright license

start time

16 November 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

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cites work

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Statistical calibration of the SEQUEST XCorr function

21 June 2018

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Improving sensitivity in proteome studies by analysis of false discovery rates for multiple search engines

21 June 2018

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Statistical design of quantitative mass spectrometry-based proteomic experiments

21 June 2018

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RAId_DbS: mass-spectrometry based peptide identification web server with knowledge integration

21 June 2018

1 reference

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Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

21 June 2018

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Enhancing peptide identification confidence by combining search methods

21 June 2018

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Calibrating E-values for MS2 database search methods

21 June 2018

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RAId_DbS: peptide identification using database searches with realistic statistics

21 June 2018

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21 June 2018

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Assessing bias in experiment design for large scale mass spectrometry-based quantitative proteomics

21 June 2018

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Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Robust accurate identification of peptides (RAId): deciphering MS2 data using a structured library search with de novo based statistics

21 June 2018

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21 June 2018

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A method for assessing the statistical significance of mass spectrometry-based protein identifications using general scoring schemes

21 June 2018

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ProbID: a probabilistic algorithm to identify peptides through sequence database searching using tandem mass spectral data

21 June 2018

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Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

21 June 2018

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Distribution of glutamine and asparagine residues and their near neighbors in peptides and proteins

21 June 2018

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21 June 2018

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Rapid and accurate peptide identification from tandem mass spectra

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0015438

Improving sensitivity by probabilistically combining results from multiple MS/MS search methodologies

21 January 2018

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Statistical Characterization of a 1D Random Potential Problem - with applications in score statistics of MS-based peptide sequencing

21 January 2018

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PubMed

https://pubmed.ncbi.nlm.nih.gov/21103371

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Experimental Protein Mixture for Validating Tandem Mass Spectral Analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21103371

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0015438

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29 July 2017

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1 reference

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29 July 2017

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