Probing osmolyte participation in the unfolding transition state of a protein (Q33912398)

Dataset for "Continued use of retracted papers: Temporal trends in citations and (lack of) awareness of retractions shown in citation contexts in biomedicine"

30 July 2017

2 references

Continued use of retracted papers: Temporal trends in citations and (lack of) awareness of retractions shown in citation contexts in biomedicine

title

Probing osmolyte participation in the unfolding transition state of a protein (English)

1 reference

30 July 2017

1

Lorna Dougan

1 reference

30 July 2017

Georgi Z Genchev

2

1 reference

30 July 2017

Hui Lu

series ordinal

3

1 reference

30 July 2017

Julio M Fernandez

series ordinal

4

1 reference

30 July 2017

language of work or name

English

0 references

publication date

25 May 2011

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

1 reference

30 July 2017

volume

108

1 reference

30 July 2017

issue

24

1 reference

30 July 2017

page(s)

9759-9764

1 reference

Water's role in the force-induced unfolding of ubiquitin.

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Naturally Occurring Osmolytes Modulate the Nanomechanical Properties of Polycystic Kidney Disease Domains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Computational and single-molecule force studies of a macro domain protein reveal a key molecular determinant for mechanical stability

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Chemistry of Hofmeister anions and osmolytes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Direct observation of an ensemble of stable collapsed states in the mechanical folding of ubiquitin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Osmolyte-induced separation of the mechanical folding phases of ubiquitin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Protein denaturation by urea: slash and bond

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Urea denaturation by stronger dispersion interactions with proteins than water implies a 2-stage unfolding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

5 July 2018

Water as a biomolecule

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

The effects of macromolecular crowding on the mechanical stability of protein molecules.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Effects of denaturants and osmolytes on proteins are accurately predicted by the molecular transfer model

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Solvent molecules bridge the mechanical unfolding transition state of a protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Probing the chemistry of thioredoxin catalysis with force

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Diffusion of glycerol through Escherichia coli aquaglyceroporin GlpF.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Force-clamp spectroscopy of single-protein monomers reveals the individual unfolding and folding pathways of I27 and ubiquitin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Dwell-time distribution analysis of polyprotein unfolding using force-clamp spectroscopy.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

A molecular mechanism for osmolyte-induced protein stability

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Do we underestimate the importance of water in cell biology?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Water mediation in protein folding and molecular recognition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Predicting the energetics of osmolyte-induced protein folding/unfolding.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

What makes an aquaporin a glycerol channel? A comparative study of AqpZ and GlpF.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

The molecular basis for the chemical denaturation of proteins by urea

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Thermodynamics. Water and ice.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Water permeation across biological membranes: mechanism and dynamics of aquaporin-1 and GlpF.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Constructing, verifying, and dissecting the folding transition state of chymotrypsin inhibitor 2 with all-atom simulations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Femtochemistry: Atomic-Scale Dynamics of the Chemical Bond Using Ultrafast Lasers (Nobel Lecture)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

The key event in force-induced unfolding of Titin's immunoglobulin domains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Mechanical and chemical unfolding of a single protein: a comparison

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

VMD: visual molecular dynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Living with water stress: evolution of osmolyte systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Volumetric properties of polyols (ethylene glycol, glycerol, meso-erythritol, xylitol and mannitol) in relation to their membrane permeability: group additivity and estimation of the maximum radius of their molecules

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116423

Equilibrium study of protein denaturation by urea

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1101934108

Hydrogen bonding progressively strengthens upon transfer of the protein urea-denatured state to water and protecting osmolytes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1101934108

Force-clamp spectroscopy monitors the folding trajectory of a single protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1101934108

How do chemical denaturants affect the mechanical folding and unfolding of proteins?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1101934108

Climatic impact of tropical lowland deforestation on nearby montane cloud forests

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1101934108

Aqueous phase separation in giant vesicles

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1101934108

A Single-Molecule Perspective on the Role of Solvent Hydrogen Bonds in Protein Folding and Chemical Reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1101934108

Reverse engineering of the giant muscle protein titin

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1101934108

The peptide backbone plays a dominant role in protein stabilization by naturally occurring osmolytes

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21613570

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Steered molecular dynamics simulations of force-induced protein domain unfolding

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21613570

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Single-molecule force spectroscopy reveals signatures of glassy dynamics in the energy landscape of ubiquitin

1 reference

30 December 2023

https://opencitations.net/index/api/v1/references/10.1073/PNAS.1101934108

Identifiers

DOI

10.1073/PNAS.1101934108

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference