Optimal codon identities in bacteria: implications from the conflicting results of two different methods. (Q33987778)

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10 February 2020

title

Optimal codon identities in bacteria: implications from the conflicting results of two different methods (English)

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10 February 2020

2

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10 February 2020

author name string

Bin Wang

1

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10 February 2020

Ying Xu

3

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10 February 2020

Jing Liu

4

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10 February 2020

Yuan Liu

5

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10 February 2020

Yue-Yu Hang

6

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10 February 2020

Jian-Qun Chen

7

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language of work or name

English

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publication date

28 July 2011

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10 February 2020

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volume

6

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issue

7

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10 February 2020

page(s)

e22714

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Creative Commons Attribution 4.0 International

10 February 2020

copyright license

start time

28 July 2011

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Synonymous but not the same: the causes and consequences of codon bias

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The influence of anticodon-codon interactions and modified bases on codon usage bias in bacteria.

5 July 2018

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Forces that influence the evolution of codon bias

5 July 2018

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General rules for optimal codon choice

5 July 2018

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Variation in the strength of selected codon usage bias among bacteria

5 July 2018

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Codon usage bias from tRNA's point of view: redundancy, specialization, and efficient decoding for translation optimization

5 July 2018

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Codon usage between genomes is constrained by genome-wide mutational processes

5 July 2018

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A simple model based on mutation and selection explains trends in codon and amino-acid usage and GC composition within and across genomes

5 July 2018

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Natural selection and the frequency distributions of "silent" DNA polymorphism in Drosophila.

5 July 2018

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Codon usage: mutational bias, translational selection, or both?

5 July 2018

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Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases

5 July 2018

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Inferring weak selection from patterns of polymorphism and divergence at "silent" sites in Drosophila DNA.

5 July 2018

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Codon catalog usage and the genome hypothesis

5 July 2018

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Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

5 July 2018

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Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type.

5 July 2018

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Codon usage and tRNA content in unicellular and multicellular organisms

5 July 2018

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An evolutionary perspective on synonymous codon usage in unicellular organisms

5 July 2018

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Rates of aminoacyl-tRNA selection at 29 sense codons in vivo.

5 July 2018

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The 'effective number of codons' used in a gene

5 July 2018

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The selection-mutation-drift theory of synonymous codon usage

5 July 2018

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Coevolution of codon usage and tRNA genes leads to alternative stable states of biased codon usage

5 July 2018

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Accounting for background nucleotide composition when measuring codon usage bias.

21 January 2018

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10.1371/JOURNAL.PONE.0022714

21 January 2018

Identifiers

DOI

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10 February 2020

0 references

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10 February 2020

PubMed publication ID

21829489

1 reference