The tRNA specificity of Thermus thermophilus EF-Tu (Q34018710)

30 July 2017

title

The tRNA specificity of Thermus thermophilus EF-Tu (English)

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30 July 2017

Thermus thermophilus

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Haruichi Asahara

1

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30 July 2017

Olke C Uhlenbeck

series ordinal

2

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30 July 2017

language of work or name

English

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publication date

12 March 2002

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Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

number of pages

6

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based on heuristic

inferred from page(s)

published in

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30 July 2017

volume

99

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30 July 2017

issue

6

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30 July 2017

page(s)

3499-3504

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Uniform binding of aminoacyl-tRNAs to elongation factor Tu by thermodynamic compensation

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Pyrophosphate mediates the effect of certain tRNA mutations on aminoacylation of yeast tRNA(Phe).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Induced fit in initial selection and proofreading of aminoacyl-tRNA on the ribosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

The crystal structure of Cys-tRNACys-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

The peculiar architectural framework of tRNASec is fully recognized by yeast AspRS.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Structural and energetic origins of indirect readout in site-specific DNA cleavage by a restriction endonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Thermus thermophilus: a link in evolution of the tRNA-dependent amino acid amidation pathways

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

DNA bending determines Fos-Jun heterodimer orientation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Antideterminants present in minihelix(Sec) hinder its recognition by prokaryotic elongation factor Tu.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Discrimination against misacylated tRNA by chloroplast elongation factor Tu.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Many of the conserved nucleotides of tRNA(Phe) are not essential for ternary complex formation and peptide elongation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Molecular recognition of tRNA(Pro) by Escherichia coli proline tRNA synthetase in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and a GTP analog

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Relative affinities of all Escherichia coli aminoacyl-tRNAs for elongation factor Tu-GTP

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Transfer RNA as a cofactor coupling amino acid synthesis with that of protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Kinetic studies of Escherichia coli elongation factor Tu-guanosine 5'-triphosphate-aminoacyl-tRNA complexes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Protein biosynthesis in organelles requires misaminoacylation of tRNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Mutants of Escherichia coli formylmethionine tRNA: a single base change enables initiator tRNA to act as an elongator in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Anticodon switching changes the identity of methionine and valine transfer RNAs.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Nucleotides in yeast tRNAPhe required for the specific recognition by its cognate synthetase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Interaction of a selenocysteine-incorporating tRNA with elongation factor Tu from E.coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Conversion of aminoacylation specificity from tRNA(Tyr) to tRNA(Ser) in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Ternary complexes of Escherichia coli aminoacyl-tRNAs with the elongation factor Tu and GTP: thermodynamic and structural studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Fluorescence characterization of the interaction of various transfer RNA species with elongation factor Tu.GTP: evidence for a new functional role for elongation factor Tu in protein biosynthesis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Anticodon and acceptor stem nucleotides in tRNAGln are major recognition elements for E. coli glutaminyl-tRNA synthetase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Identity determinants ofE.colitryptophan tRNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

The role of anticodon bases and the discriminator nucleotide in the recognition of some E. coli tRNAs by their aminoacyl-tRNA synthetases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Escherichia coli tRNA(Asp) recognition mechanism differing from that of the yeast system

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Determination of recognition nucleotides for Escherichia coli phenylalanyl-tRNA synthetase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Striking effects of coupling mutations in the acceptor stem on recognition of tRNAs by Escherichia coli Met-tRNA synthetase and Met-tRNA transformylase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

In vitro study of E.coli tRNA(Arg) and tRNA(Lys) identity elements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Ion effects on ligand-nucleic acid interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Evidence for the double-sieve editing mechanism in protein synthesis. Steric exclusion of isoleucine by valyl-tRNA synthetases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Equilibrium measurements of cognate and noncognate interactions between aminoacyl transfer RNA synthetases and transfer RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Mechanism of Discrimination between Cognate and Non-cognate tRNs by Phenylalanyl-tRNA:Synthetase from Yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122552

Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

In vitro analysis of translational rate and accuracy with an unmodified tRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Identification of thermodynamically relevant interactions between EF-Tu and backbone elements of tRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Pentalysine-deoxyribonucleic acid interactions: a model for the general effects of ion concentrations on the interactions of proteins with nucleic acids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Molecular recognition of the identity-determinant set of isoleucine transfer RNA from Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Identity determinants of E. coli threonine tRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Domain-specific recruitment of amide amino acids for protein synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

tRNA-dependent asparagine formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

A simple structural feature is a major determinant of the identity of a transfer RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Recognition of yeast tRNA(Phe) by its cognate yeast phenylalanyl-tRNA synthetase: an analysis of specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Identity determinants of E. coli tRNA(Val)

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Synthetase recognition determinants of E. coli valine transfer RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Triple aminoacylation specificity of a chimerized transfer RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

RNA double-helical fragments at atomic resolution. II. The crystal structure of sodium guanylyl-3',5'-cytidine nonahydrate

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Direct versus indirect readout in the interaction of the trp repressor with non-canonical binding sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

A 2-thiouridine derivative in tRNAGlu is a positive determinant for aminoacylation by Escherichia coli glutamyl-tRNA synthetase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

Recognition nucleotides of Escherichia coli tRNA(Leu) and its elements facilitating discrimination from tRNASer and tRNA(Tyr)

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052028599

21 January 2018

Identifiers

DOI

10.1073/PNAS.052028599

1 reference

30 July 2017

0 references

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30 July 2017

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