A group II intron encodes a functional LAGLIDADG homing endonuclease and self-splices under moderate temperature and ionic conditions (Q34075929)

30 July 2017

title

A group II intron encodes a functional LAGLIDADG homing endonuclease and self-splices under moderate temperature and ionic conditions (English)

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30 July 2017

author name string

Sahra-Taylor Mullineux

1

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30 July 2017

Maria Costa

2

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30 July 2017

Gurminder S Bassi

3

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30 July 2017

François Michel

4

1 reference

30 July 2017

Georg Hausner

5

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30 July 2017

language of work or name

English

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publication date

23 July 2010

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30 July 2017

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30 July 2017

volume

16

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30 July 2017

issue

9

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30 July 2017

page(s)

1818-1831

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The tertiary structure of group II introns: implications for biological function and evolution

30 July 2017

cites work

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A broadscale phylogenetic analysis of group II intron RNAs and intron-encoded reverse transcriptases

5 July 2018

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Characterization of Mycobacterium leprae RecA intein, a LAGLIDADG homing endonuclease, reveals a unique mode of DNA binding, helical distortion, and cleavage compared with a canonical LAGLIDADG homing endonuclease

5 July 2018

1 reference

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Genes within genes: multiple LAGLIDADG homing endonucleases target the ribosomal protein S3 gene encoded within an rnl group I intron of Ophiostoma and related taxa

5 July 2018

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Selfish DNA: homing endonucleases find a home

5 July 2018

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The sporadic occurrence of a group I intron-like element in the mtDNA rnl gene of Ophiostoma novo-ulmi subsp. americana

5 July 2018

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Group II introns: structure, folding and splicing mechanism

5 July 2018

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Folding of group II introns: a model system for large, multidomain RNAs?

5 July 2018

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Inteins, introns, and homing endonucleases: recent revelations about the life cycle of parasitic genetic elements

5 July 2018

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Homing endonuclease structure and function

5 July 2018

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Optional mitochondrial introns and evidence for a homing-endonuclease gene in the mtDNA rnl gene in Ophiostoma ulmi s. lat.

5 July 2018

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Group II intron retroelements: function and diversity

5 July 2018

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The recent transfer of a homing endonuclease gene

5 July 2018

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5 July 2018

Mobile group II introns

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Homing endonuclease genes: the rise and fall and rise again of a selfish element

5 July 2018

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Two for the price of one: a bifunctional intron-encoded DNA endonuclease-RNA maturase.

5 July 2018

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The crystal structure of the gene targeting homing endonuclease I-SceI reveals the origins of its target site specificity

5 July 2018

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Group II introns: structure and catalytic versatility of large natural ribozymes

5 July 2018

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A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes

5 July 2018

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Lariat formation and a hydrolytic pathway in plant chloroplast group II intron splicing

5 July 2018

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Recruitment of intron-encoded and co-opted proteins in splicing of the bI3 group I intron RNA.

5 July 2018

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Coevolution of group II intron RNA structures with their intron-encoded reverse transcriptases

5 July 2018

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Rapid evolution of the DNA-binding site in LAGLIDADG homing endonucleases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

A three-dimensional perspective on exon binding by a group II self-splicing intron

5 July 2018

1 reference

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Recurrent invasion and extinction of a selfish gene

5 July 2018

1 reference

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Homing endonucleases: structure, function and evolution

5 July 2018

1 reference

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DNA recognition and cleavage by the LAGLIDADG homing endonuclease I-CreI

5 July 2018

1 reference

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Differential chemical probing of a group II self-splicing intron identifies bases involved in tertiary interactions and supports an alternative secondary structure model of domain V

5 July 2018

1 reference

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A protein encoded by a group I intron in Aspergillus nidulans directly assists RNA splicing and is a DNA endonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Homing endonucleases: keeping the house in order

5 July 2018

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Profile of the DNA recognition site of the archaeal homing endonuclease I-DmoI.

5 July 2018

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Group I and group II introns

5 July 2018

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A site-specific endonuclease encoded by a typical archaeal intron

5 July 2018

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Introns as mobile genetic elements

5 July 2018

1 reference

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Evolution of mobile group I introns: recognition of intron sequences by an intron-encoded endonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

A group II intron RNA is a catalytic component of a DNA endonuclease involved in intron mobility

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Structure and activities of group II introns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Mobile group II introns of yeast mitochondrial DNA are novel site-specific retroelements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Sequence of the intron and flanking exons of the mitochondrial 21S rRNA gene of yeast strains having different alleles at the ω and rib-1 loci

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Comparative and functional anatomy of group II catalytic introns—a review

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Protein encoded by the third intron of cytochrome b gene in Saccharomyces cerevisiae is an mRNA maturase. Analysis of mitochondrial mutants, RNA transcripts proteins and evolutionary relationships

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Excised group II introns in yeast mitochondria are lariats and can be formed by self-splicing in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Self-splicing of the mobile group II intron of the filamentous fungus Podospora anserina (COI I1) in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Activation of the catalytic core of a group I intron by a remote 3' splice junction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Characterization of intein homing endonuclease encoded in the DNA polymerase gene of Thermococcus marinus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

A free-standing homing endonuclease targets an intron insertion site in the psbA gene of cyanophages.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Thermodynamics of DNA target site recognition by homing endonucleases.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Evolution from DNA to RNA recognition by the bI3 LAGLIDADG maturase.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Kinetic and thermodynamic framework for assembly of the six-component bI3 group I intron ribonucleoprotein catalyst

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Identification of a family of group II introns encoding LAGLIDADG ORFs typical of group I introns

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Characterization of the cleavage site and the recognition sequence of the I-CreI DNA endonuclease encoded by the chloroplast ribosomal intron of Chlamydomonas reinhardtii.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

Group II self-splicing introns in bacteria

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2924541

A group II self-splicing intron from the brown alga Pylaiella littoralis is active at unusually low magnesium concentrations and forms populations of molecules with a uniform conformation

28 October 2018

1 reference

12 December 2020

The maturase encoded by a group I intron from Aspergillus nidulans stabilizes RNA tertiary structure and promotes rapid splicing

1 reference

12 December 2020

Group II intron mobility occurs by target DNA-primed reverse transcription

1 reference

12 December 2020

Two competing pathways for self-splicing by group II introns: a quantitative analysis of in vitro reaction rates and products

1 reference

12 December 2020

The Cryphonectria parasitica mitochondrial rns gene: Plasmid-like elements, introns and homing endonucleases

1 reference

12 December 2020

Reverse transcriptase and reverse splicing activities encoded by the mobile group II intron cobI1 of fission yeast mitochondrial DNA

1 reference

12 December 2020

A self-splicing RNA excises an intron lariat

1 reference

12 December 2020

Self-splicing of group II introns in vitro: mapping of the branch point and mutational inhibition of lariat formation

1 reference

12 December 2020

Group II intron self-splicing. Alternative reaction conditions yield novel products

1 reference

12 December 2020

Identifiers

DOI

10.1261/RNA.2184010

1 reference

30 July 2017

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30 July 2017

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