Heritable epigenetic variation among maize inbreds (Q34085631)

30 July 2017

Heritable epigenetic variation among maize inbreds (English)

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30 July 2017

12

1 reference

30 July 2017

James C Schnable

3

0 references

Michael Freeling

10

object named as

Michael Freeling

1 reference

30 July 2017

11

Patrick S Schnable

1 reference

30 July 2017

6

Sanzhen Liu

1 reference

30 July 2017

13

Nathan M Springer

1 reference

30 July 2017

Ruth A Swanson-Wagner

2

object named as

Ruth A Swanson-Wagner

1 reference

30 July 2017

4

Amanda J Waters

1 reference

30 July 2017

Steve R Eichten

1

1 reference

30 July 2017

Peter J Hermanson

5

1 reference

30 July 2017

Cheng-Ting Yeh

7

1 reference

30 July 2017

Yi Jia

8

1 reference

30 July 2017

Karla Gendler

9

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30 July 2017

17 November 2011

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30 July 2017

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30 July 2017

7

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11

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30 July 2017

e1002372

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Creative Commons Attribution 4.0 International

30 July 2017

start time

17 November 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

limma

object named as

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/3219600

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature

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Natural epigenetic variation in plant species: a view from the field

5 July 2018

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Genes identified by visible mutant phenotypes show increased bias toward one of two subgenomes of maize

5 July 2018

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Quantitative epigenetics through epigenomic perturbation of isogenic lines

5 July 2018

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Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss

5 July 2018

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Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor

5 July 2018

1 reference

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RNA-mediated trans-communication can establish paramutation at the b1 locus in maize

5 July 2018

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Conservation and divergence of methylation patterning in plants and animals

5 July 2018

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A first-generation haplotype map of maize

5 July 2018

1 reference

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The B73 Maize Genome: Complexity, Diversity, and Dynamics

5 July 2018

1 reference

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Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Mu transposon insertion sites and meiotic recombination events co-localize with epigenetic marks for open chromatin across the maize genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Genetic properties of the maize nested association mapping population

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Assessing the impact of transgenerational epigenetic variation on complex traits

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes.

5 July 2018

1 reference

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An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites.

5 July 2018

1 reference

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Highly integrated single-base resolution maps of the epigenome in Arabidopsis

5 July 2018

1 reference

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Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Epigenetic interactions between transposons and genes: lessons from plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

5 July 2018

Population epigenetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Genetic design and statistical power of nested association mapping in maize

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Natural variation for alleles under epigenetic control by the maize chromomethylase zmet2.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Epigenetic natural variation in Arabidopsis thaliana

5 July 2018

1 reference

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Phenotypic plasticity and the epigenetics of human disease

5 July 2018

1 reference

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Perceptions of epigenetics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

The plant genome's methylation status and response to stress: implications for plant improvement

5 July 2018

1 reference

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Transposable elements and the epigenetic regulation of the genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Environmental epigenomics and disease susceptibility

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

VIM1, a methylcytosine-binding protein required for centromeric heterochromatinization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

A faster circular binary segmentation algorithm for the analysis of array CGH data

5 July 2018

1 reference

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Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

5 July 2018

1 reference

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

5 July 2018

1 reference

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Inherited epigenetic variation--revisiting soft inheritance

5 July 2018

1 reference

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Organization and variability of the maize genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

The maize genome as a model for efficient sequence analysis of large plant genomes

5 July 2018

1 reference

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Molecular and functional diversity of maize

5 July 2018

1 reference

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Gardening the genome: DNA methylation in Arabidopsis thaliana

5 July 2018

1 reference

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Role of transposable elements in heterochromatin and epigenetic control

5 July 2018

1 reference

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Chromatin conversations: mechanisms and implications of paramutation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

The control of natural variation in cytosine methylation in Arabidopsis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Epialleles - a source of random variation in times of stress

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Epigenetic variation in Arabidopsis disease resistance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

5 July 2018

Paramutation in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Epigenetic inheritance at the agouti locus in the mouse

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

An epigenetic mutation responsible for natural variation in floral symmetry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Hypermethylated SUPERMAN epigenetic alleles in arabidopsis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Epigenetic control of an endogenous gene family is revealed by a novel blue fluorescent mutant of Arabidopsis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Epigenetic regulation of the maize Spm transposon

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3219600

Epigenome dynamics: a quantitative genetics perspective.

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

Genome-wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

Germline epimutation of MLH1 in individuals with multiple cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

Heritable transposon silencing initiated by a naturally occurring transposon inverted duplication

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

Genomic imprinting, methylation and molecular evolution of maize Enhancer of zeste (Mez) homologs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

Allelic genome structural variations in maize detected by array comparative genome hybridization

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

The developmental dynamics of the maize leaf transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

B73-Mo17 near-isogenic lines demonstrate dispersed structural variation in maize

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002372

Maternal and paternal alleles exhibit differential histone methylation and acetylation at maize imprinted genes

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22125494

12 December 2020

inferred from PubMed ID database lookup

Epialleles via DNA methylation: consequences for plant evolution

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22125494

12 December 2020

inferred from PubMed ID database lookup

Genetic variation in epigenetic inheritance of ribosomal RNA gene methylation in Arabidopsis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22125494

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1371/JOURNAL.PGEN.1002372

1 reference

release_nlgy2lw7gvbhxm5sn2wv7niw3a

30 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/nlgy2lw7gvbhxm5sn2wv7niw3a

24 November 2022

mapped directly with Wikidata item

PMCID

3219600

1 reference

30 July 2017

1 reference