Gene expression and stress response mediated by the epigenetic regulation of a transposable element small RNA. (Q34162313)

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23 January 2020

title

Gene expression and stress response mediated by the epigenetic regulation of a transposable element small RNA (English)

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23 January 2020

author

Saivageethi Nuthikattu

2

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23 January 2020

author name string

Andrea D McCue

1

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23 January 2020

Sarah H Reeder

3

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23 January 2020

R Keith Slotkin

4

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23 January 2020

publication date

9 February 2012

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23 January 2020

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23 January 2020

volume

8

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23 January 2020

issue

2

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23 January 2020

page(s)

e1002474

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Creative Commons Attribution 4.0 International

23 January 2020

copyright license

start time

9 February 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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5 July 2018

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AGO1-miR173 complex initiates phased siRNA formation in plants

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs

5 July 2018

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An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal

5 July 2018

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5 July 2018

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Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs

5 July 2018

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Insertion bias and purifying selection of retrotransposons in the Arabidopsis thaliana genome

5 July 2018

1 reference

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Stress granule assembly is mediated by prion-like aggregation of TIA-1

5 July 2018

1 reference

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cis-Acting determinants of heterochromatin formation on Drosophila melanogaster chromosome four

5 July 2018

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Herpes simplex virus 1 induces cytoplasmic accumulation of TIA-1/TIAR and both synthesis and cytoplasmic accumulation of tristetraprolin, two cellular proteins that bind and destabilize AU-rich RNAs

5 July 2018

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Role of transposable elements in heterochromatin and epigenetic control

5 July 2018

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5 July 2018

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5 July 2018

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Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification

5 July 2018

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Arabidopsis HEN1: a genetic link between endogenous miRNA controlling development and siRNA controlling transgene silencing and virus resistance

5 July 2018

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Athila4 of Arabidopsis and Calypso of soybean define a lineage of endogenous plant retroviruses

5 July 2018

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Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis

5 July 2018

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Initial sequencing and analysis of the human genome

5 July 2018

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Dynamic shuttling of TIA-1 accompanies the recruitment of mRNA to mammalian stress granules

5 July 2018

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TIA-1 is a translational silencer that selectively regulates the expression of TNF-alpha

5 July 2018

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Endogenous targets of transcriptional gene silencing in Arabidopsis

5 July 2018

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RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2 alpha to the assembly of mammalian stress granules

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276544

Meiotically and mitotically stable inheritance of DNA hypomethylation induced by ddm1 mutation of Arabidopsis thaliana

5 July 2018

1 reference

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Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelope-like proteins

5 July 2018

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5 July 2018

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Patterns of gene action in plant development revealed by enhancer trap and gene trap transposable elements

5 July 2018

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The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci

5 July 2018

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Selective epigenetic control of retrotransposition in Arabidopsis.

21 January 2018

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Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense.

21 January 2018

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Retracted: Small RNA duplexes function as mobile silencing signals between plant cells.

21 January 2018

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Plant stress granules and mRNA processing bodies are distinct from heat stress granules

21 January 2018

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Criteria for annotation of plant MicroRNAs

21 January 2018

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Interplay between two epigenetic marks. DNA methylation and histone H3 lysine 9 methylation

21 January 2018

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Atypical RNA polymerase subunits required for RNA-directed DNA methylation

21 January 2018

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A role for RNAi in the selective correction of DNA methylation defects.

21 January 2018

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Highly specific gene silencing by artificial microRNAs in Arabidopsis.

21 January 2018

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SMN deficiency reduces cellular ability to form stress granules, sensitizing cells to stress.

21 January 2018

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Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1.

21 January 2018

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Heritable transposon silencing initiated by a naturally occurring transposon inverted duplication

21 January 2018

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Assaying chimeric genes in plants: The GUS gene fusion system

21 January 2018

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The Polerovirus silencing suppressor P0 targets ARGONAUTE proteins for degradation.

21 January 2018

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Pollen-specific gene expression in transgenic plants: coordinate regulation of two different tomato gene promoters during microsporogenesis

21 January 2018

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12 December 2020

Arabidopsis thaliana DNA methylation mutants

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Silencing of retrotransposons in arabidopsis and reactivation by the ddm1 mutation

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[Stress activation and genomic impact of plant retrotransposons]

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DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal

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Perfect seed pairing is not a generally reliable predictor for miRNA-target interactions

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10.1371/JOURNAL.PGEN.1002474

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22346759%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22346759%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

PubMed publication ID

22346759

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22346759%20AND%20SRC:MED&resulttype=core&format=json