Characterization of the human beta-globin downstream promoter region. (Q34770915)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12582249%20AND%20SRC:MED&resulttype=core&format=json

18 December 2019

title

Characterization of the human beta-globin downstream promoter region (English)

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18 December 2019

5

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18 December 2019

author name string

Kelly M Leach

1

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18 December 2019

Karen F Vieira

2

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18 December 2019

Sung-Hae Lee Kang

3

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18 December 2019

Ara Aslanian

4

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18 December 2019

Robert G Roeder

6

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18 December 2019

Jörg Bungert

7

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18 December 2019

language of work or name

English

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publication date

1 February 2003

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18 December 2019

published in

Nucleic Acids Research

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18 December 2019

volume

31

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18 December 2019

issue

4

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18 December 2019

page(s)

1292-1301

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Upstream stimulatory factor activates the vasopressin promoter via multiple motifs, including a non-canonical E-box

18 December 2019

cites work

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Physical and functional interactions of histone deacetylase 3 with TFII-I family proteins and PIASxbeta

7 July 2018

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Combining chromatin immunoprecipitation and DNA footprinting: a novel method to analyze protein-DNA interactions in vivo

7 July 2018

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The human beta-globin locus control region

7 July 2018

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Upstream stimulatory factors regulate aortic preferentially expressed gene-1 expression in vascular smooth muscle cells

7 July 2018

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Activation of beta-major globin gene transcription is associated with recruitment of NF-E2 to the beta-globin LCR and gene promoter

7 July 2018

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Reconstitution of human beta-globin locus control region hypersensitive sites in the absence of chromatin assembly.

7 July 2018

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Stimulation of NF-E2 DNA binding by CREB-binding protein (CBP)-mediated acetylation

7 July 2018

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Developmentally dynamic histone acetylation pattern of a tissue-specific chromatin domain

7 July 2018

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Context-dependent EKLF responsiveness defines the developmental specificity of the human epsilon-globin gene in erythroid cells of YAC transgenic mice

7 July 2018

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The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters

7 July 2018

1 reference

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A downstream element in the human beta-globin promoter: evidence of extended sequence-specific transcription factor IID contacts

7 July 2018

1 reference

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Looping, linking, and chromatin activity: new insights into beta-globin locus regulation

7 July 2018

1 reference

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Looping versus linking: toward a model for long-distance gene activation

7 July 2018

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The initiator element: a paradigm for core promoter heterogeneity within metazoan protein-coding genes

7 July 2018

1 reference

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Genomic cloning and promoter analysis of aortic preferentially expressed gene-1. Identification of a vascular smooth muscle-specific promoter mediated by an E box motif

7 July 2018

1 reference

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7 July 2018

1 reference

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The locus control region is necessary for gene expression in the human beta-globin locus but not the maintenance of an open chromatin structure in erythroid cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

Multiple domains for initiator binding proteins TFII-I and YY-1 are present in the initiator and upstream regions of the rat XDH/XO TATA-less promoter

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

Cloning of an inr- and E-box-binding protein, TFII-I, that interacts physically and functionally with USF1

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

Role of E box and initiator region in the expression of the rat follicle-stimulating hormone receptor

7 July 2018

1 reference

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The role of general initiation factors in transcription by RNA polymerase II

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

Human transcription factor USF stimulates transcription through the initiator elements of the HIV-1 and the Ad-ML promoters

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

In vivo footprinting and genomic sequencing by ligation-mediated PCR.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

Lethal beta-thalassaemia in mice lacking the erythroid CACCC-transcription factor EKLF

7 July 2018

1 reference

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Defective haematopoiesis in fetal liver resulting from inactivation of the EKLF gene

7 July 2018

1 reference

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A novel, erythroid cell-specific murine transcription factor that binds to the CACCC element and is related to the Krüppel family of nuclear proteins

7 July 2018

1 reference

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A functional initiator element in the human beta-globin promoter

7 July 2018

1 reference

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57 Sequencing end-labeled DNA with base-specific chemical cleavages

7 July 2018

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Human growth hormone as a reporter gene in regulation studies employing transient gene expression

7 July 2018

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A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

7 July 2018

1 reference

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Yeast and human TATA-binding proteins have nearly identical DNA sequence requirements for transcription in vitro

7 July 2018

1 reference

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Cooperative interaction of an initiator-binding transcription initiation factor and the helix-loop-helix activator USF

7 July 2018

1 reference

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Activation of class II gene transcription by regulatory factors is potentiated by a novel activity

7 July 2018

1 reference

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Multiple in vivo footprints are specific to the active allele of the X-linked human hypoxanthine phosphoribosyltransferase gene 5' region: implications for X chromosome inactivation

7 July 2018

1 reference

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Hb Antalya [codons 3-5 (Leu-Thr-Pro-->Ser-Asp-Ser)]: a new unstable variant leading to chronic microcytic anemia and high Hb A2.

7 July 2018

1 reference

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A basal transcription factor that activates or represses transcription.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

Beta-globin gene switching and DNase I sensitivity of the endogenous beta-globin locus in mice do not require the locus control region.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

Effects of altered gene order or orientation of the locus control region on human beta-globin gene expression in mice.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150227

The stability of the TFIIA-TBP-DNA complex is dependent on the sequence of the TATAAA element

26 October 2018

1 reference

12 December 2020

Distinct mechanisms control RNA polymerase II recruitment to a tissue-specific locus control region and a downstream promoter

1 reference

12 December 2020

Transcription factor eUSF is an essential component of isolated transcription complexes on the duck histone H5 gene and it mediates the interaction of TFIID with a TATA-deficient promoter

1 reference

12 December 2020

TFII is required for transcription of the naturally TATA-less but initiator-containing Vbeta promoter

1 reference

12 December 2020

Do LCRs open chromatin domains?

1 reference

12 December 2020

An in vitro system for expression analysis of mutations of the beta-globin gene: validation and application to two mutations in the 5' UTR

1 reference

12 December 2020

Upstream stimulatory factor 2 stimulates transcription through an initiator element in the mouse cytochrome c oxidase subunit Vb promoter

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKG209

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12582249%20AND%20SRC:MED&resulttype=core&format=json

18 December 2019

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12582249%20AND%20SRC:MED&resulttype=core&format=json

18 December 2019

PubMed publication ID

12582249

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12582249%20AND%20SRC:MED&resulttype=core&format=json