Dietary input of microbes and host genetic variation shape among-population differences in stickleback gut microbiota (Q35613911)

9 August 2017

Dietary input of microbes and host genetic variation shape among-population differences in stickleback gut microbiota (English)

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9 August 2017

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4

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9 August 2017

5

Daniel I Bolnick

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9 August 2017

3

J Gregory Caporaso

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9 August 2017

2

Lisa K Snowberg

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9 August 2017

Chris C R Smith

1

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9 August 2017

24 April 2015

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9 August 2017

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9 August 2017

9

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9 August 2017

2515-2526

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9 August 2017

11

1 reference

https://scigraph.springernature.com/pub.10.1038/ismej.2015.64

9 August 2017

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cites work

Individual diet has sex-dependent effects on vertebrate gut microbiota

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Stepwise threshold clustering: a new method for genotyping MHC loci using next-generation sequencing technology

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Major Histocompatibility Complex class IIb polymorphism influences gut microbiota composition and diversity

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Individuals' diet diversity influences gut microbial diversity in two freshwater fish (threespine stickleback and Eurasian perch).

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Evolutionary inferences from the analysis of exchangeability

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Significant changes in the skin microbiome mediated by the sport of roller derby

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Thymus-derived regulatory T cells contribute to tolerance to commensal microbiota

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Biphasic assembly of the murine intestinal microbiota during early development

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Regulation of intestinal microbiota by the NLR protein family

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Nod-like receptors in intestinal host defense: controlling pathogens, the microbiota, or both?

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

The application of ecological theory toward an understanding of the human microbiome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Interactions between the microbiota and the immune system

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Host-gut microbiota metabolic interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

The genomic basis of adaptive evolution in threespine sticklebacks

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Gut microbiota, diet, and heart disease

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Microbial community changes elicited by exposure to cyanobacterial allelochemicals

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Linking long-term dietary patterns with gut microbial enterotypes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Gut microbiota, intestinal permeability, obesity-induced inflammation, and liver injury

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Predicting a human gut microbiota's response to diet in gnotobiotic mice

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

The Toll-like receptor 2 pathway establishes colonization by a commensal of the human microbiota

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Gram negative bacteria are associated with the early stages of necrotizing enterocolitis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Diet, gut microbiota and immune responses

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Major histocompatibility complex polymorphism: dynamics and consequences of parasite-mediated local adaptation in fishes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Along the speciation continuum in sticklebacks.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Dissecting the in vivo metabolic potential of two human gut acetogens

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Interactions of gut microbiota with functional food components and nutraceuticals.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

High-fat diet determines the composition of the murine gut microbiome independently of obesity

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Worlds within worlds: evolution of the vertebrate gut microbiota

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Diet-induced obesity is linked to marked but reversible alterations in the mouse distal gut microbiome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Global patterns in bacterial diversity

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Assembly of the human intestinal microbiota

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Phylogenetic diversity theory sheds light on the structure of microbial communities

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Toll-like receptor-gut microbiota interactions: perturb at your own risk!

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Supervised classification of human microbiota

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Specialization of trophic position and habitat use by sticklebacks in an adaptive radiation

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

QIIME allows analysis of high-throughput community sequencing data

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Disturbance of the gut-associated lymphoid tissue is associated with disease progression in chronic HIV infection

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

A review on the interactions between gut microbiota and innate immunity of fish.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

UniFrac: a new phylogenetic method for comparing microbial communities

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4611514

Is It Time for a Metagenomic Basis of Therapeutics?

25 September 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.64

The Humpbacked Species Richness-Curve: A Contingent Rule for Community Ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.64

Genotype Is a Stronger Determinant than Sex of the Mouse Gut Microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.64

Rapid genetic divergence in postglacial populations of threespine stickleback (Gasterosteus aculeatus): the role of habitat type, drainage and geographical proximity

21 January 2018

1 reference

12 December 2020

The genetic basis for bacterial mercury methylation

1 reference

12 December 2020

Bacterial Interactions in Early Life Stages of Marine Cold Water Fish

1 reference

12 December 2020

Quantitative variations in the bacterial flora of flatfish

1 reference

12 December 2020

Sympatric Speciation in Threespine Stickleback: Why Not?

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.64

7 January 2021

inferred from DOI database lookup

Covarying variances: more morphologically variable populations also exhibit more diet variation.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.64

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/ISMEJ.2015.64

1 reference

PubMed ID

25909977

Dimensions Publication ID

9 August 2017

0 references

1 reference

9 August 2017

1 reference

PubMed ID

25909977