PAF Complex Plays Novel Subunit-Specific Roles in Alternative Cleavage and Polyadenylation (Q35893857)

11 August 2017

PAF Complex Plays Novel Subunit-Specific Roles in Alternative Cleavage and Polyadenylation (English)

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11 August 2017

5

Steven Shen

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11 August 2017

Yan Yang

1

1 reference

11 August 2017

Wencheng Li

2

1 reference

11 August 2017

Mainul Hoque

3

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11 August 2017

Liming Hou

4

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11 August 2017

Bin Tian

6

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11 August 2017

Brian D Dynlacht

7

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11 August 2017

14 January 2016

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11 August 2017

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11 August 2017

12

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11 August 2017

1

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11 August 2017

e1005794

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Creative Commons Attribution 4.0 International

11 August 2017

start time

14 January 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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PAF1, a Molecular Regulator of Promoter-Proximal Pausing by RNA Polymerase II

11 July 2018

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Characterization of the Human Transcription Elongation Factor Rtf1: Evidence for Nonoverlapping Functions of Rtf1 and the Paf1 Complex

11 July 2018

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The end of the message: multiple protein-RNA interactions define the mRNA polyadenylation site

11 July 2018

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Systematic profiling of poly(A)+ transcripts modulated by core 3' end processing and splicing factors reveals regulatory rules of alternative cleavage and polyadenylation

11 July 2018

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Getting up to speed with transcription elongation by RNA polymerase II

11 July 2018

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Foxk proteins repress the initiation of starvation-induced atrophy and autophagy programs.

11 July 2018

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Threonine-4 of the budding yeast RNAP II CTD couples transcription with Htz1-mediated chromatin remodeling.

11 July 2018

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CFIm25 links alternative polyadenylation to glioblastoma tumour suppression.

11 July 2018

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Sizing up the poly(A) tail: insights from deep sequencing

11 July 2018

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A role for H3K4 monomethylation in gene repression and partitioning of chromatin readers.

11 July 2018

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The PAF complex and Prf1/Rtf1 delineate distinct Cdk9-dependent pathways regulating transcription elongation in fission yeast

11 July 2018

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A feed forward circuit comprising Spt6, Ctk1 and PAF regulates Pol II CTD phosphorylation and transcription elongation

11 July 2018

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Control of mRNA stability contributes to low levels of nuclear poly(A) binding protein 1 (PABPN1) in skeletal muscle

11 July 2018

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Promoter directionality is controlled by U1 snRNP and polyadenylation signals

11 July 2018

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Alternative cleavage and polyadenylation: extent, regulation and function

11 July 2018

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Alternative cleavage and polyadenylation: the long and short of it

11 July 2018

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The histone chaperone Spt6 coordinates histone H3K27 demethylation and myogenesis

11 July 2018

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Analysis of alternative cleavage and polyadenylation by 3' region extraction and deep sequencing.

11 July 2018

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Poly(A) binding protein nuclear 1 levels affect alternative polyadenylation

11 July 2018

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U1 snRNP determines mRNA length and regulates isoform expression

11 July 2018

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The poly(A)-binding protein nuclear 1 suppresses alternative cleavage and polyadenylation sites.

11 July 2018

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mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription

11 July 2018

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Dynamic loss of H2B ubiquitylation without corresponding changes in H3K4 trimethylation during myogenic differentiation

11 July 2018

1 reference

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Human Polymerase-Associated Factor complex (PAFc) connects the Super Elongation Complex (SEC) to RNA polymerase II on chromatin

11 July 2018

1 reference

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RNA polymerase II kinetics in polo polyadenylation signal selection.

11 July 2018

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Genome-wide remodeling of the epigenetic landscape during myogenic differentiation.

11 July 2018

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The PAF1 complex differentially regulates cardiomyocyte specification

11 July 2018

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Transcriptional activators enhance polyadenylation of mRNA precursors

11 July 2018

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U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation

11 July 2018

1 reference

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Uniform transitions of the general RNA polymerase II transcription complex

11 July 2018

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TIF1gamma controls erythroid cell fate by regulating transcription elongation

11 July 2018

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The PAF complex synergizes with MLL fusion proteins at HOX loci to promote leukemogenesis

11 July 2018

1 reference

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Multiple interactions recruit MLL1 and MLL1 fusion proteins to the HOXA9 locus in leukemogenesis

11 July 2018

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c-Myc regulates transcriptional pause release

11 July 2018

1 reference

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The human PAF1 complex acts in chromatin transcription elongation both independently and cooperatively with SII/TFIIS

11 July 2018

1 reference

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The Paf1 complex: platform or player in RNA polymerase II transcription?

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Reprogramming of 3' untranslated regions of mRNAs by alternative polyadenylation in generation of pluripotent stem cells from different cell types

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

DSIF, the Paf1 complex, and Tat-SF1 have nonredundant, cooperative roles in RNA polymerase II elongation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

RNA polymerase II associated factor 1/PD2 maintains self-renewal by its interaction with Oct3/4 in mouse embryonic stem cells

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

CDK9 directs H2B monoubiquitination and controls replication-dependent histone mRNA 3'-end processing

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

The tumor suppressor Cdc73 functionally associates with CPSF and CstF 3' mRNA processing factors

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Direct interactions between the Paf1 complex and a cleavage and polyadenylation factor are revealed by dissociation of Paf1 from RNA polymerase II.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Retinoblastoma tumor suppressor protein-dependent methylation of histone H3 lysine 27 is associated with irreversible cell cycle exit

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Protein factors in pre-mRNA 3'-end processing.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Drosophila Paf1 modulates chromatin structure at actively transcribed genes.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

A Requirement for the Saccharomyces cerevisiae Paf1 complex in snoRNA 3' end formation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

The human PAF complex coordinates transcription with events downstream of RNA synthesis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

A large-scale analysis of mRNA polyadenylation of human and mouse genes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

The parafibromin tumor suppressor protein is part of a human Paf1 complex

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Interaction between transcription elongation factors and mRNA 3'-end formation at the Saccharomyces cerevisiae GAL10-GAL7 locus.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Ctr9, Rtf1, and Leo1 are components of the Paf1/RNA polymerase II complex

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Chromatin association of human origin recognition complex, cdc6, and minichromosome maintenance proteins during the cell cycle: assembly of prereplication complexes in late mitosis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Specific transcriptional pausing activates polyadenylation in a coupled in vitro system

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Short GCG expansions in the PABP2 gene cause oculopharyngeal muscular dystrophy

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

PAF is in the cabal of MLL1-interacting proteins that promote leukemia.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

A posttranscriptional role for the yeast Paf1-RNA polymerase II complex is revealed by identification of primary targets.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4713055

Alternative mRNA polyadenylation in eukaryotes: an effective regulator of gene expression

24 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1005794

10.1371/JOURNAL.PGEN.1005794

21 January 2018

Identifiers

DOI

1 reference

11 August 2017

1 reference

11 August 2017

PubMed publication ID

26765774

1 reference