Quantitative proteomics targeting classes of motif-containing peptides using immunoaffinity-based mass spectrometry (Q36144149)

12 August 2017

Quantitative proteomics targeting classes of motif-containing peptides using immunoaffinity-based mass spectrometry (English)

1 reference

12 August 2017

Niclas Olsson

1

1 reference

12 August 2017

Peter James

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2

1 reference

12 August 2017

Carl A K Borrebaeck

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3

1 reference

12 August 2017

Christer Wingren

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4

1 reference

12 August 2017

27 April 2012

1 reference

Molecular & Cellular Proteomics

12 August 2017

1 reference

12 August 2017

11

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12 August 2017

342-354

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12 August 2017

8

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Molecular serum portraits in patients with primary breast cancer predict the development of distant metastases

12 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

A dynamic model of proteome changes reveals new roles for transcript alteration in yeast

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

A targeted proteomics-based pipeline for verification of biomarkers in plasma

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Proteomic analysis and discovery using affinity proteomics and mass spectrometry

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Systematic antibody and antigen-based proteomic profiling with microarrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Serum protein profiling of systemic lupus erythematosus and systemic sclerosis using recombinant antibody microarrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Targeting peptide termini, a novel immunoaffinity approach to reduce complexity in mass spectrometric protein identification

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Value of using multiple proteases for large-scale mass spectrometry-based proteomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

High-throughput generation of selected reaction-monitoring assays for proteins and proteomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

An automated and multiplexed method for high throughput peptide immunoaffinity enrichment and multiple reaction monitoring mass spectrometry-based quantification of protein biomarkers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Design of high-density antibody microarrays for disease proteomics: key technological issues

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Proteome wide screening using peptide affinity capture

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Strategy for surveying the proteome using affinity proteomics and mass spectrometry

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Antibody-based microarrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

STRING 8--a global view on proteins and their functional interactions in 630 organisms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

The yeast GID complex, a novel ubiquitin ligase (E3) involved in the regulation of carbohydrate metabolism

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

How Saccharomyces responds to nutrients

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

The biological impact of mass-spectrometry-based proteomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

High-throughput proteomics using antibody microarrays: an update

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Rapid, transcript-specific changes in splicing in response to environmental stress

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Applications of antibody array platforms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Status of complete proteome analysis by mass spectrometry: SILAC labeled yeast as a model system

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Multiplexed protein measurement: technologies and applications of protein and antibody arrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Profiling bladder cancer using targeted antibody arrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Degradation of the gluconeogenic enzymes fructose-1,6-bisphosphatase and malate dehydrogenase is mediated by distinct proteolytic pathways and signaling events

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

WebLogo: A Sequence Logo Generator

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Global analysis of protein expression in yeast

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Mass spectrometry-based proteomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Recombining germline-derived CDR sequences for creating diverse single-framework antibody libraries

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Optimal selection of epitopes for TXP-immunoaffinity mass spectrometry

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3412966

Mass spectrometric quantitation of peptides and proteins using Stable Isotope Standards and Capture by Anti-Peptide Antibodies (SISCAPA).

2 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.016238

Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.016238

Preserving the yeast proteome from sample degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.016238

Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.016238

Comparative proteome analysis of Saccharomyces cerevisiae grown in chemostat cultures limited for glucose or ethanol

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.016238

Comprehensive quantitative analysis of central carbon and amino-acid metabolism in Saccharomyces cerevisiae under multiple conditions by targeted proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.016238

Global gene expression during short-term ethanol stress in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.016238

Analysis of adaptation to high ethanol concentration in Saccharomyces cerevisiae using DNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.016238

Transferring proteomic discoveries into clinical practice

21 January 2018

1 reference

12 December 2020

Tissue proteome profiling of preeclamptic placenta using recombinant antibody microarrays

1 reference

12 December 2020

Practical proteomic biomarker discovery: taking a step back to leap forward

1 reference

12 December 2020

Large-scale proteomics analysis of human ovarian cancer for biomarkers

1 reference

12 December 2020

Identifiers

DOI

10.1074/MCP.M111.016238

1 reference

12 August 2017

1 reference

12 August 2017

1 reference