Theoretical study of the partial molar volume change associated with the pressure-induced structural transition of ubiquitin. (Q36393545)

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2 January 2020

title

Theoretical study of the partial molar volume change associated with the pressure-induced structural transition of ubiquitin (English)

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2 January 2020

4

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2 January 2020

author name string

Takashi Imai

series ordinal

1

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2 January 2020

Shusaku Ohyama

series ordinal

2

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2 January 2020

Andriy Kovalenko

series ordinal

3

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2 January 2020

publication date

27 July 2007

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2 January 2020

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2 January 2020

volume

16

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2 January 2020

issue

9

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2 January 2020

page(s)

1927-1933

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Locating missing water molecules in protein cavities by the three-dimensional reference interaction site model theory of molecular solvation.

2 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Protein unfolding, amyloid fibril formation and configurational energy landscapes under high pressure conditions

30 September 2017

1 reference

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What lies in the future of high-pressure bioscience?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Cooperative water filling of a nonpolar protein cavity observed by high-pressure crystallography and simulation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

NMR snapshots of a fluctuating protein structure: ubiquitin at 30 bar-3 kbar.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Pressure denaturation of staphylococcal nuclease studied by neutron small-angle scattering and molecular simulation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Molecular probes: what is the range of their interaction with the environment?

30 September 2017

1 reference

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Some factors in the interpretation of protein denaturation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

The solution structure of bovine pancreatic trypsin inhibitor at high pressure

30 September 2017

1 reference

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Pressure-dependent changes in the solution structure of hen egg-white lysozyme

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Food processing by high hydrostatic pressure

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Revisiting volume changes in pressure-induced protein unfolding.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

High pressure effects on biological macromolecules: from structural changes to alteration of cellular processes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

The pressure dependence of hydrophobic interactions is consistent with the observed pressure denaturation of proteins.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

On volume changes accompanying conformational transitions of biopolymers

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

VMD: visual molecular dynamics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Pressure stability of proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Theoretical study of the cosolvent effect on the partial molar volume change of staphylococcal nuclease associated with pressure denaturation.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Crucial importance of translational entropy of water in pressure denaturation of proteins.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Theoretical study of volume changes accompanying xenon-lysozyme binding: implications for the molecular mechanism of pressure reversal of anesthesia

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Theoretical study of volume changes associated with the helix-coil transition of an alanine-rich peptide in aqueous solution

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Hydrophobic effects on partial molar volume.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Theoretical study for volume changes associated with the helix-coil transition of peptides

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206979

Two folded conformers of ubiquitin revealed by high-pressure NMR

21 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17660257

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Partial molar volume of proteins studied by the three-dimensional reference interaction site model theory

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17660257

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1110/PS.072909007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17660257%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17660257%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

PubMed publication ID

17660257

1 reference