Selective excision of 5-carboxylcytosine by a thymine DNA glycosylase mutant. (Q36674636)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23337108%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

title

Selective excision of 5-carboxylcytosine by a thymine DNA glycosylase mutant (English)

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22 February 2020

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1

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22 February 2020

author name string

Xing Zhang

series ordinal

2

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22 February 2020

Xiaodong Cheng

series ordinal

3

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22 February 2020

language of work or name

English

0 references

publication date

19 January 2013

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Journal of Molecular Biology

22 February 2020

published in

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22 February 2020

volume

425

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22 February 2020

issue

6

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22 February 2020

page(s)

971-976

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Excision of 5-hydroxymethyluracil and 5-carboxylcytosine by the thymine DNA glycosylase domain: its structural basis and implications for active DNA demethylation

22 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA

30 September 2017

1 reference

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Lesion processing by a repair enzyme is severely curtailed by residues needed to prevent aberrant activity on undamaged DNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

Thymine DNA glycosylase specifically recognizes 5-carboxylcytosine-modified DNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: potential implications for active demethylation of CpG sites

30 September 2017

1 reference

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Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

30 September 2017

1 reference

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Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

30 September 2017

1 reference

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Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair

30 September 2017

1 reference

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The discovery of 5-formylcytosine in embryonic stem cell DNA.

30 September 2017

1 reference

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Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

30 September 2017

1 reference

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Dependence of substrate binding and catalysis on pH, ionic strength, and temperature for thymine DNA glycosylase: Insights into recognition and processing of G·T mispairs

30 September 2017

1 reference

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Tissue distribution of 5-hydroxymethylcytosine and search for active demethylation intermediates

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

30 September 2017

1 reference

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Crystal structure of human thymine DNA glycosylase bound to DNA elucidates sequence-specific mismatch recognition

30 September 2017

1 reference

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The intricate structural chemistry of base excision repair machinery: implications for DNA damage recognition, removal, and repair.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

DNA base damage recognition and removal: new twists and grooves

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

Structure and specificity of the vertebrate anti-mutator uracil-DNA glycosylase SMUG1

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

How a mismatch repair enzyme balances the needs for efficient lesion processing and minimal action on undamaged DNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

A novel, sensitive, and specific assay for abasic sites, the most commonly produced DNA lesion.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

Oligodeoxynucleotides containing synthetic abasic sites. Model substrates for DNA polymerases and apurinic/apyrimidinic endonucleases.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3594372

An ultracentrifugation analysis of two hundred fish genomes

20 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23337108

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.JMB.2013.01.013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23337108%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference

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22 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23337108%20AND%20SRC:MED&resulttype=core&format=json