Proteomics of proteasome complexes and ubiquitinated proteins (Q36973779)

17 August 2017

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title

Proteomics of proteasome complexes and ubiquitinated proteins (English)

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17 August 2017

main subject

protein ubiquitination

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Xiaorong Wang

1

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17 August 2017

Cortnie Guerrero

series ordinal

2

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17 August 2017

Peter Kaiser

series ordinal

3

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17 August 2017

Lan Huang

series ordinal

4

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17 August 2017

publication date

1 October 2007

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Expert Review of Proteomics

17 August 2017

published in

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17 August 2017

volume

4

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17 August 2017

issue

5

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17 August 2017

page(s)

649-665

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The 26S proteasome: a molecular machine designed for controlled proteolysis

17 August 2017

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Multiubiquitin chain receptors define a layer of substrate selectivity in the ubiquitin-proteasome system

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Delivery of ubiquitinated substrates to protein-unfolding machines

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Proteasome subunit Rpn1 binds ubiquitin-like protein domains

21 January 2018

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Ubiquitin-like proteins and Rpn10 play cooperative roles in ubiquitin-dependent proteolysis.

21 January 2018

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Interaction of the anaphase-promoting complex/cyclosome and proteasome protein complexes with multiubiquitin chain-binding proteins

21 January 2018

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Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome

21 January 2018

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Rad23 and Rpn10 serve as alternative ubiquitin receptors for the proteasome

21 January 2018

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A proteasomal ATPase subunit recognizes the polyubiquitin degradation signal

21 January 2018

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Deubiquitinating enzymes are IN/(trinsic to proteasome function).

21 January 2018

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Editing of ubiquitin conjugates by an isopeptidase in the 26S proteasome

21 January 2018

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A proteasome for all occasions

21 January 2018

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Ubiquitin chains are remodeled at the proteasome by opposing ubiquitin ligase and deubiquitinating activities.

21 January 2018

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The base of the proteasome regulatory particle exhibits chaperone-like activity

21 January 2018

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Proteasomal proteomics: identification of nucleotide-sensitive proteasome-interacting proteins by mass spectrometric analysis of affinity-purified proteasomes

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Functional assignment of the 20 S proteasome from Trypanosoma brucei using mass spectrometry and new bioinformatics approaches.

21 January 2018

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An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network.

21 January 2018

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Mapping the murine cardiac 26S proteasome complexes

21 January 2018

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Regulation of murine cardiac 20S proteasomes: role of associating partners

21 January 2018

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The murine cardiac 26S proteasome: an organelle awaiting exploration

21 January 2018

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Structural organization of the 19S proteasome lid: insights from MS of intact complexes.

21 January 2018

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20S proteasomes have the potential to keep substrates in store for continual degradation.

21 January 2018

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A proteomics approach to understanding protein ubiquitination

21 January 2018

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Proteomic identification of ubiquitinated proteins from human cells expressing His-tagged ubiquitin

21 January 2018

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Weighing in on ubiquitin: the expanding role of mass-spectrometry-based proteomics

21 January 2018

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Analysis of polyubiquitin conjugates reveals that the Rpn10 substrate receptor contributes to the turnover of multiple proteasome targets

21 January 2018

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Comprehensive quantitative proteome analysis of 20S proteasome subtypes from rat liver by isotope coded affinity tag and 2-D gel-based approaches

21 January 2018

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The 26S proteasome in garlic (Allium sativum): purification and partial characterization

21 January 2018

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The regulatory complex of Drosophila melanogaster 26S proteasomes. Subunit composition and localization of a deubiquitylating enzyme

21 January 2018

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Purification of the Arabidopsis 26 S proteasome: biochemical and molecular analyses revealed the presence of multiple isoforms

21 January 2018

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Mapping and structural dissection of human 20 S proteasome using proteomic approaches

21 January 2018

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N-Terminal modifications of the 19S regulatory particle subunits of the yeast proteasome

21 January 2018

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Multiple associated proteins regulate proteasome structure and function

21 January 2018

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A generic protein purification method for protein complex characterization and proteome exploration

21 January 2018

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21 January 2018

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21 January 2018

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Proteome survey reveals modularity of the yeast cell machinery

21 January 2018

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Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

21 January 2018

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A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway

21 January 2018

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21 January 2018

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Posttranslational modification of the 20S proteasomal proteins of the archaeon Haloferax volcanii

21 January 2018

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The subunit structure and dynamics of the 20S proteasome in chicken skeletal muscle

21 January 2018

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A quantitative proteomic approach using two-dimensional gel electrophoresis and isotope-coded affinity tag labeling for studying human 20S proteasome heterogeneity

21 January 2018

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Electrophoretic analysis of phosphorylation of the yeast 20S proteasome

21 January 2018

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Identification of three phosphorylation sites in the alpha7 subunit of the yeast 20S proteasome in vivo using mass spectrometry

21 January 2018

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Exploring proteasome complexes by proteomic approaches

21 January 2018

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Different proteasome subtypes in a single tissue exhibit different enzymatic properties.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Subtypes of 20S proteasomes from skeletal muscle

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Hybrid proteasomes. Induction by interferon-gamma and contribution to ATP-dependent proteolysis

21 January 2018

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Global organization and function of mammalian cytosolic proteasome pools: Implications for PA28 and 19S regulatory complexes

21 January 2018

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Two-dimensional Blue native/SDS gel electrophoresis of multi-protein complexes from whole cellular lysates: a proteomics approach

21 January 2018

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Nalpha -terminal acetylation of eukaryotic proteins

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Comparative proteome analysis of changes in the 26S proteasome during oocyte maturation in goldfish

21 January 2018

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Hyperphosphorylation of rat liver proteasome subunits: the effects of ethanol and okadaic acid are compared

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Phosphorylation of proteasomes in mammalian cells

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Assembly of the 26S proteasome is regulated by phosphorylation of the p45/Rpt6 ATPase subunit

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Proteasome function is regulated by cyclic AMP-dependent protein kinase through phosphorylation of Rpt6

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Phosphorylation of ATPase subunits of the 26S proteasome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Phosphorylation of proteasomes in mammalian cells. Identification of two phosphorylated subunits and the effect of phosphorylation on activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Phosphorylation of 20S proteasome alpha subunit C8 (alpha7) stabilizes the 26S proteasome and plays a role in the regulation of proteasome complexes by gamma-interferon

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Phosphorylation of C8 and C9 subunits of the multicatalytic proteinase by casein kinase II and identification of the C8 phosphorylation sites by direct mutagenesis

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Large-scale characterization of HeLa cell nuclear phosphoproteins

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Immunoaffinity profiling of tyrosine phosphorylation in cancer cells

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry

21 January 2018

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https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Glycosylation of nucleocytoplasmic proteins: signal transduction and O-GlcNAc

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

26S proteasome subunits are O-linked N-acetylglucosamine-modified in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

O-GlcNAc modification is an endogenous inhibitor of the proteasome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Ogt-dependent X-chromosome-linked protein glycosylation is a requisite modification in somatic cell function and embryo viability

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Oxidative modification of proteasome: identification of an oxidation-sensitive subunit in 26 S proteasome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Inactivation of the proteasome by 4-hydroxy-2-nonenal is site specific and dependant on 20S proteasome subtypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

The regulation of proteasome degradation by multi-ubiquitin chain binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Proteins interacting with the 26S proteasome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

The ubiquitin-related BAG-1 provides a link between the molecular chaperones Hsc70/Hsp70 and the proteasome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Protein turnover: a CHIP programmed for proteolysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Regulated interaction between polypeptide chain elongation factor-1 complex with the 26S proteasome during Xenopus oocyte maturation

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Proteasome-mediated degradation of cotranslationally damaged proteins involves translation elongation factor 1A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Saccharomyces cerevisiae Ub-conjugating enzyme Ubc4 binds the proteasome in the presence of translationally damaged proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Proteomic insights into ubiquitin and ubiquitin-like proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Global approaches to understanding ubiquitination

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

N-Terminal ubiquitination of extracellular signal-regulated kinase 3 and p21 directs their degradation by the proteasome

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Ubiquitination on nonlysine residues by a viral E3 ubiquitin ligase

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

TAK1 is a ubiquitin-dependent kinase of MKK and IKK

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Proteolysis-independent regulation of the transcription factor Met4 by a single Lys 48-linked ubiquitin chain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Certain pairs of ubiquitin-conjugating enzymes (E2s) and ubiquitin-protein ligases (E3s) synthesize nondegradable forked ubiquitin chains containing all possible isopeptide linkages.

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

A subset of membrane-associated proteins is ubiquitinated in response to mutations in the endoplasmic reticulum degradation machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Functional and quantitative proteomics using SILAC

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

Quantitative analysis of in vitro ubiquitinated cyclin B1 reveals complex chain topology

21 January 2018

1 reference

https://api.crossref.org/works/10.1586%2F14789450.4.5.649

21 January 2018

Identifiers

DOI

10.1586/14789450.4.5.649

1 reference

release_l756gefeenhkxlbpjpuvksui3a

17 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/l756gefeenhkxlbpjpuvksui3a

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference