Smarter clustering methods for SNP genotype calling (Q37319565)

19 August 2017

Smarter clustering methods for SNP genotype calling (English)

1 reference

19 August 2017

Eleanor Feingold

6

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author name string

Yan Lin

1

1 reference

19 August 2017

George C Tseng

2

1 reference

19 August 2017

Soo Yeon Cheong

3

1 reference

19 August 2017

Lora J H Bean

4

1 reference

19 August 2017

Stephanie L Sherman

5

1 reference

19 August 2017

language of work or name

English

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publication date

29 September 2008

1 reference

19 August 2017

1 reference

19 August 2017

24

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19 August 2017

23

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19 August 2017

2665-2671

1 reference

A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.

19 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Effects of differential genotyping error rate on the type I error probability of case-control studies

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Genotyping errors: causes, consequences and solutions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Population structure, differential bias and genomic control in a large-scale, case-control association study

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Factors affecting statistical power in the detection of genetic association

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

High-throughput SNP genotyping on universal bead arrays

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

AN INVESTIGATION OF THE EFFECT OF MISCLASSIFICATION ON THE PROPERTIES OF CHI-2-TESTS IN THE ANALYSIS OF CATEGORICAL DATA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

A transmission/disequilibrium test that allows for genotyping errors in the analysis of single-nucleotide polymorphism data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Bayesian Gaussian Mixture Models for High-Density Genotyping Arrays

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

A genotype calling algorithm for the Illumina BeadArray platform

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

GEL: a novel genotype calling algorithm using empirical likelihood

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

A genotype calling algorithm for affymetrix SNP arrays.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Dynamic model based algorithms for screening and genotyping over 100 K SNPs on oligonucleotide microarrays

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Linkage disequilibrium mapping in trisomic populations: analytical approaches and an application to congenital heart defects in Down syndrome.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Genotyping of single nucleotide polymorphism using model-based clustering

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

A trisomic transmission disequilibrium test

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Algorithms for large-scale genotyping microarrays

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

Power and sample size calculations for case-control genetic association tests when errors are present: application to single nucleotide polymorphisms

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732271

10.1093/BIOINFORMATICS/BTN509

2 September 2018

Identifiers

DOI

1 reference

journals/bioinformatics/LinTCBSF08

19 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

19 August 2017

PubMed publication ID

18826959

1 reference