Beyond genetics: epigenetic code in chronic kidney disease (Q37402757)

20 August 2017

Beyond genetics: epigenetic code in chronic kidney disease (English)

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20 August 2017

Rama S Dwivedi

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20 August 2017

James G Herman

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2

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20 August 2017

Timothy A McCaffrey

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3

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20 August 2017

Dominic S C Raj

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4

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20 August 2017

language of work or name

English

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publication date

29 September 2010

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20 August 2017

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20 August 2017

79

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20 August 2017

23-32

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20 August 2017

1

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https://scigraph.springernature.com/pub.10.1038/ki.2010.335

20 August 2017

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6 September 2017

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Hyperglycemia induces a dynamic cooperativity of histone methylase and demethylase enzymes associated with gene-activating epigenetic marks that coexist on the lysine tail

6 September 2017

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6 September 2017

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Transient high glucose causes persistent epigenetic changes and altered gene expression during subsequent normoglycemia

6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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Genome-wide association study for renal traits in the Framingham Heart and Atherosclerosis Risk in Communities Studies

6 September 2017

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Dissecting direct reprogramming through integrative genomic analysis

6 September 2017

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The road to genome-wide association studies

6 September 2017

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Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

6 September 2017

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DNA methyltransferase and histone deacetylase inhibitors in the treatment of myelodysplastic syndromes

6 September 2017

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Genetic and epigenetic factors are associated with expression of respiratory chain component NDUFB6 in human skeletal muscle

6 September 2017

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Genome-wide analysis of DNA methylation patterns

6 September 2017

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Epigenetics and complex disease: from etiology to new therapeutics

6 September 2017

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Cytokine gene polymorphism and progression of renal and cardiovascular diseases

6 September 2017

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6 September 2017

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DNA methylation profiling of human chromosomes 6, 20 and 22

6 September 2017

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Whole-genome re-sequencing

6 September 2017

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Environmental and nutritional effects on the epigenetic regulation of genes

6 September 2017

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The emerging science of epigenomics

6 September 2017

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Mining literature for a comprehensive pathway analysis: a case study for retrieval of homocysteine related genes for genetic and epigenetic studies

6 September 2017

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Intensive Diabetes Treatment and Cardiovascular Disease in Patients with Type 1 Diabetes

6 September 2017

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Genetics of progressive renal failure in diabetic kidney disease

6 September 2017

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Core transcriptional regulatory circuitry in human embryonic stem cells

6 September 2017

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Inactivation of monocarboxylate transporter MCT3 by DNA methylation in atherosclerosis

6 September 2017

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Stem cell approaches for the treatment of renal failure

6 September 2017

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Data-mining analysis suggests an epigenetic pathogenesis for type 2 diabetes

6 September 2017

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Epigenetic differences arise during the lifetime of monozygotic twins

6 September 2017

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Aberrant DNA methylation as a cancer-inducing mechanism

6 September 2017

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Epigenetic reprogramming in mammals

6 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

6 September 2017

From genome to epigenome

1 reference

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Gene-nutrient interactions in one-carbon metabolism

6 September 2017

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Nutrition and aberrant DNA methylation patterns in atherosclerosis: more than just hyperhomocysteinemia?

6 September 2017

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A pancreatic islet-specific microRNA regulates insulin secretion

6 September 2017

1 reference

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CpG island methylation in gastroenterologic neoplasia: a maturing field.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

MicroRNA-143 regulates adipocyte differentiation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Epigenetics and human disease

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

A stepwise epigenetic process controls immunoglobulin allelic exclusion

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

The role of RNA interference in heterochromatic silencing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Mechanisms of gene silencing by double-stranded RNA

6 September 2017

1 reference

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Histones and histone modifications

6 September 2017

1 reference

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Epigenetics in human disease and prospects for epigenetic therapy

6 September 2017

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DNA methylation polymorphisms precede any histological sign of atherosclerosis in mice lacking apolipoprotein E.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Epithelial-mesenchymal transition and its implications for fibrosis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

MicroRNAs modulate hematopoietic lineage differentiation

6 September 2017

1 reference

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Gene silencing in cancer in association with promoter hypermethylation

6 September 2017

1 reference

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SOCS-3 is frequently silenced by hypermethylation and suppresses cell growth in human lung cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Methylation and demethylation in the regulation of genes, cells, and responses in the immune system

6 September 2017

1 reference

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Dicer is essential for mouse development

6 September 2017

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Epigenetics and the Environment

6 September 2017

1 reference

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The power and the promise of DNA methylation markers

6 September 2017

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Sequence information can be obtained from single DNA molecules

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Evaluation of a potential epigenetic biomarker by quantitative methyl-single nucleotide polymorphism analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Epigenetic regulation of T cell fate and function

6 September 2017

1 reference

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Mitochondrial transcription factor A (mtTFA) and diabetes

6 September 2017

1 reference

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DNA methylation, chromatin inheritance, and cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Re-SET-ting heterochromatin by histone methyltransferases

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

The role of folic acid and Vitamin B12 in genomic stability of human cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Genome-wide location and function of DNA binding proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Cytosine methylation confers instability on the cardiac troponin T gene in hypertrophic cardiomyopathy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Homocysteine and cardiovascular disease: cause or effect?

6 September 2017

1 reference

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Methylation-induced repression--belts, braces, and chromatin

6 September 2017

1 reference

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Epigenetics: regulation through repression

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

COBRA: a sensitive and quantitative DNA methylation assay

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Rapid quantitation of methylation differences at specific sites using methylation-sensitive single nucleotide primer extension (Ms-SNuPE)

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Enzymatic methyl esterification of erythrocyte membrane proteins is impaired in chronic renal failure. Evidence for high levels of the natural inhibitor S-adenosylhomocysteine.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Purification of CpG islands using a methylated DNA binding column

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Chromosomal insertion of foreign (adenovirus type 12, plasmid, or bacteriophage lambda) DNA is associated with enhanced methylation of cellular DNA segments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

RNA interference-mediated knockdown of DNA methyltransferase 1 leads to promoter demethylation and gene re-expression in human lung and breast cancer cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

The methyl-CpG-binding protein MeCP2 links DNA methylation to histone methylation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Methylation of the estrogen receptor-alpha gene promoter is selectively increased in proliferating human aortic smooth muscle cells.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Deletional, mutational, and methylation analyses of CDKN2 (p16/MTS1) in primary and metastatic prostate cancer

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

DNA demethylation during the differentiation of 3T3-L1 cells affects the expression of the mouse GLUT4 gene

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Progression of incipient diabetic retinopathy during good glycemic control.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Hypermethylation of hepatic Gck promoter in ageing rats contributes to diabetogenic potential

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Association between global leukocyte DNA methylation, renal function, carotid intima-media thickness and plasma homocysteine in patients with stage 2-4 chronic kidney disease

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Impact of inflammation on epigenetic DNA methylation - a novel risk factor for cardiovascular disease?

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

MIRA-assisted microarray analysis, a new technology for the determination of DNA methylation patterns, identifies frequent methylation of homeodomain-containing genes in lung cancer cells.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Skeletal muscle, cytokines, and oxidative stress in end-stage renal disease

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

An association between variants in the IGF2 gene and Beckwith-Wiedemann syndrome: interaction between genotype and epigenotype.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Increased homocysteine and S-adenosylhomocysteine concentrations and DNA hypomethylation in vascular disease

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Folate treatment and unbalanced methylation and changes of allelic expression induced by hyperhomocysteinaemia in patients with uraemia.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

T(H) cell differentiation is accompanied by dynamic changes in histone acetylation of cytokine genes.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

p16(INK4a) and histology-specific methylation of CpG islands by exposure to tobacco smoke in non-small cell lung cancer.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Genomic DNA methylation decreases in response to moderate folate depletion in elderly women.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Local hypomethylation in atherosclerosis found in rabbit ec-sod gene.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

New goals for the U.S. Human Genome Project: 1998-2003.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Detection of aberrant promoter hypermethylation of tumor suppressor genes in serum DNA from non-small cell lung cancer patients

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3867804

Epidemiology of acute kidney injury

2 October 2018

1 reference

12 December 2020

Interleukin-6 regulation of the human DNA methyltransferase (HDNMT) gene in human erythroleukemia cells

1 reference

12 December 2020

Intrauterine exposure to diabetes conveys risks for type 2 diabetes and obesity: a study of discordant sibships

1 reference

12 December 2020

An integrated epigenetic and genetic approach to common human disease

1 reference

12 December 2020

Can reduced folic acid and vitamin B12 levels cause deficient DNA methylation producing mutations which initiate atherosclerosis?

1 reference

12 December 2020

Genomic imprinting and allelic exclusion

1 reference

12 December 2020

Development of gene therapies for cardiovascular and renal diseases by nucleic acid medicines

1 reference

12 December 2020

Overexpression of mitochondrial transcription factor a ameliorates mitochondrial deficiencies and cardiac failure after myocardial infarction

1 reference

12 December 2020

Transformed but not normal hepatocytes express UCP2

1 reference

12 December 2020

E-cadherin expression is silenced by DNA hypermethylation in human breast and prostate carcinomas

1 reference

12 December 2020

Functionality of circulating DNA: the hypothesis of genometastasis

1 reference

12 December 2020

S-adenosylmethionine synthetase is overexpressed in murine neuroblastoma cells resistant to nucleoside analogue inhibitors of S-adenosylhomocysteine hydrolase: a novel mechanism of drug resistance

1 reference

12 December 2020

MDR1 hypermethylation contributes to the progression of neuroblastoma

1 reference

12 December 2020

Prevalence and Correlates of Elevated Serum Creatinine Levels

1 reference

12 December 2020

MTHFR variants reduce the risk of G:C->A:T transition mutations within the p53 tumor suppressor gene in colon tumors

1 reference

12 December 2020

Epigenetics at the epicenter of modern medicine

1 reference

12 December 2020

DNA methylation in serum of breast cancer patients: an independent prognostic marker

1 reference

12 December 2020

Repression of the IL-6 gene is associated with hypermethylation

1 reference

12 December 2020

Homocysteine metabolism in renal failure

1 reference

12 December 2020

Identifiers

DOI

10.1038/KI.2010.335

1 reference

Dimensions Publication ID

20 August 2017

1003613419

0 references

Fatcat ID

release_ech2wrvtorgjpg53cyiunbygcm

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ech2wrvtorgjpg53cyiunbygcm

24 November 2022

mapped directly with Wikidata item

1 reference

20 August 2017

1 reference