Recovering unused information in genome-wide association studies: the benefit of analyzing SNPs out of Hardy-Weinberg equilibrium (Q37485380)

20 August 2017

Recovering unused information in genome-wide association studies: the benefit of analyzing SNPs out of Hardy-Weinberg equilibrium (English)

1 reference

genome-wide association study

20 August 2017

0 references

4

Rudolph E Tanzi

1 reference

20 August 2017

3

Lars Bertram

1 reference

20 August 2017

1

David W Fardo

1 reference

20 August 2017

K David Becker

2

1 reference

PMC publication ID

2796342

20 August 2017

Christoph Lange

series ordinal

5

1 reference

20 August 2017

3 June 2009

1 reference

European Journal of Human Genetics

20 August 2017

1 reference

20 August 2017

17

1 reference

20 August 2017

12

1 reference

20 August 2017

1676-1682

1 reference

Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Genome-wide association study of restless legs syndrome identifies common variants in three genomic regions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Genomewide association analysis of coronary artery disease

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Genome-wide association study of prostate cancer identifies a second risk locus at 8q24

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

A genome-wide association study identifies novel risk loci for type 2 diabetes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

The merits of testing Hardy-Weinberg equilibrium in the analysis of unmatched case-control data: a cautionary note

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Detection of genotyping errors by Hardy-Weinberg equilibrium testing.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Detection and integration of genotyping errors in statistical genetics

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Probability of detection of genotyping errors and mutations as inheritance inconsistencies in nuclear-family data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

A transmission/disequilibrium test that allows for genotyping errors in the analysis of single-nucleotide polymorphism data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Assessing departure from Hardy-Weinberg equilibrium in the presence of disease association

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

A genome-wide association study of sporadic ALS in a homogenous Irish population.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Genome-wide association study identifies a second prostate cancer susceptibility variant at 8q24.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

On the usage of HWE for identifying genotyping errors.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

The effects of SNP genotyping errors on the power of the Cochran-Armitage linear trend test for case/control association studies.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

A genotype calling algorithm for affymetrix SNP arrays.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Rational inferences about departures from Hardy-Weinberg equilibrium

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Quantifying the percent increase in minimum sample size for SNP genotyping errors in genetic model-based association studies

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

What SNP genotyping errors are most costly for genetic association studies?

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2796342

Detection of genotyping errors and pseudo-SNPs via deviations from Hardy-Weinberg equilibrium

2 September 2018

1 reference

12 December 2020

Quantification of the power of Hardy-Weinberg equilibrium testing to detect genotyping error

1 reference

12 December 2020

Hardy-Weinberg quality control

1 reference

12 December 2020

Assessment and management of single nucleotide polymorphism genotype errors in genetic association analysis

1 reference

12 December 2020

Statistical methods for the analysis of genetic association studies

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FEJHG.2009.85

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/EJHG.2009.85

1 reference

20 August 2017

1 reference

PMC publication ID

2796342

20 August 2017

PubMed publication ID

19491930

1 reference

PMC publication ID

2796342