Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells (Q37519510)

20 August 2017

Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells (English)

1 reference

20 August 2017

5

1 reference

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11 June 2020

Harmen van de Werken

8

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11 June 2020

Wilfred F J van IJcken

10

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11 June 2020

author name string

Jessica Zuin

1

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11 June 2020

Jesse R Dixon

2

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11 June 2020

Michael I J A van der Reijden

3

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11 June 2020

Zhen Ye

4

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11 June 2020

Rutger W W Brouwer

6

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11 June 2020

Mariëtte P C van de Corput

7

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11 June 2020

Tobias A Knoch

9

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11 June 2020

Frank G Grosveld

11

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11 June 2020

Bing Ren

12

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11 June 2020

Kerstin S Wendt

13

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11 June 2020

language of work or name

English

0 references

publication date

13 December 2013

1 reference

Proceedings of the National Academy of Sciences of the United States of America

20 August 2017

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11 June 2020

volume

111

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11 June 2020

page(s)

996-1001

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11 June 2020

issue

3

1 reference

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Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments

11 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Characterization of constitutive CTCF/cohesin loci: a possible role in establishing topological domains in mammalian genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Architectural protein subclasses shape 3D organization of genomes during lineage commitment

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Topological domains in mammalian genomes identified by analysis of chromatin interactions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

A role for cohesin in T-cell-receptor rearrangement and thymocyte differentiation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Conserved, developmentally regulated mechanism couples chromosomal looping and heterochromatin barrier activity at the homeobox gene A locus

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Mediator and cohesin connect gene expression and chromatin architecture

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Cell type specificity of chromatin organization mediated by CTCF and cohesin.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Hox genes and segmentation of the hindbrain and axial skeleton

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

CTCF: master weaver of the genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Architectural roles of multiple chromatin insulators at the human apolipoprotein gene cluster

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

CTCF physically links cohesin to chromatin

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Cohesins functionally associate with CTCF on mammalian chromosome arms

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Cohesin mediates transcriptional insulation by CCCTC-binding factor

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

An evaluation of 3C-based methods to capture DNA interactions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Chromosomal cohesin forms a ring

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Sister-chromatid separation at anaphase onset is promoted by cleavage of the cohesin subunit Scc1

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Super-resolution imaging reveals three-dimensional folding dynamics of the β-globin locus upon gene activation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

The dynamic architecture of Hox gene clusters.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Cell-type-specific TEV protease cleavage reveals cohesin functions in Drosophila neurons

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3903193

Cleavage of cohesin rings coordinates the separation of centrioles and chromatids

2 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24335803

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1317788111

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24335803%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

0 references

1 reference

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11 June 2020

1 reference

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