EuPathDB: the eukaryotic pathogen genomics database resource (Q37556856)

21 August 2017

EuPathDB: the eukaryotic pathogen genomics database resource (English)

1 reference

21 August 2017

0 references

1 reference

Christiane Hertz-Fowler

14

Christiane Hertz-Fowler

0 references

Jessica C Kissinger

17

Jessica C Kissinger

0 references

Evelina Y Basenko

Evelina Y Basenko

3

0 references

Fatima Silva-Franco

Fatima Silva-Franco

24

0 references

Kathryn Crouch

Kathryn Crouch

7

0 references

Sascha Steinbiss

Sascha Steinbiss

25

0 references

David S Roos

David S Roos

22

0 references

Cristina Aurrecoechea

1

Cristina Aurrecoechea

1 reference

21 August 2017

Christian J Stoeckert

26

Christian J Stoeckert

1 reference

21 August 2017

29

Susanne Warrenfeltz

1 reference

21 August 2017

Ana Barreto

2

1 reference

21 August 2017

John Brestelli

4

1 reference

21 August 2017

Brian P Brunk

5

1 reference

21 August 2017

Shon Cade

6

1 reference

21 August 2017

Ryan Doherty

8

1 reference

21 August 2017

Dave Falke

9

1 reference

21 August 2017

Steve Fischer

10

1 reference

21 August 2017

Bindu Gajria

11

1 reference

21 August 2017

Omar S Harb

12

1 reference

21 August 2017

Mark Heiges

13

1 reference

21 August 2017

Sufen Hu

15

1 reference

21 August 2017

John Iodice

16

1 reference

21 August 2017

Cris Lawrence

18

1 reference

21 August 2017

Wei Li

19

1 reference

21 August 2017

Deborah F Pinney

20

1 reference

21 August 2017

Jane A Pulman

21

1 reference

21 August 2017

Achchuthan Shanmugasundram

23

1 reference

21 August 2017

Drew Spruill

27

1 reference

21 August 2017

Haiming Wang

28

1 reference

21 August 2017

Jie Zheng

30

1 reference

21 August 2017

language of work or name

English

0 references

publication date

29 November 2016

1 reference

21 August 2017

Nucleic Acids Research

1 reference

21 August 2017

45

1 reference

21 August 2017

D1

1 reference

21 August 2017

D581-D591

1 reference

Creative Commons Attribution-NonCommercial 4.0 International

21 August 2017

start time

29 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A Genome-wide CRISPR Screen in Toxoplasma Identifies Essential Apicomplexan Genes

1 reference

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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

23 August 2017

1 reference

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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

KEGG as a reference resource for gene and protein annotation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

A Framework for Global Collaborative Data Management for Malaria Research

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Plasmodium falciparum Protein Microarray Antibody Profiles Correlate With Protection From Symptomatic Malaria in Kenya

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Submicroscopic and asymptomatic Plasmodium falciparum and Plasmodium vivax infections are common in western Thailand - molecular and serological evidence

23 August 2017

1 reference

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Malaria transmission, infection, and disease at three sites with varied transmission intensity in Uganda: implications for malaria control

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Genome-wide regulatory dynamics of translation in the Plasmodium falciparum asexual blood stages

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Extensive stage-regulation of translation revealed by ribosome profiling of Trypanosoma brucei

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

HTSeq--a Python framework to work with high-throughput sequencing data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Cloud-based bioinformatics workflow platform for large-scale next-generation sequencing analyses

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

PATRIC, the bacterial bioinformatics database and analysis resource

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Virus pathogen database and analysis resource (ViPR): a comprehensive bioinformatics database and analysis resource for the coronavirus research community

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

EuPathDB: the eukaryotic pathogen database

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Proteome remodelling during development from blood to insect-form Trypanosoma brucei quantified by SILAC and mass spectrometry

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Admixture and recombination among Toxoplasma gondii lineages explain global genome diversity

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

LeishCyc: a guide to building a metabolic pathway database and visualization of metabolomic data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Influenza research database: an integrated bioinformatics resource for influenza research and surveillance.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

GeneDB--an annotation database for pathogens

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

FungiDB: an integrated functional genomics database for fungi

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

SignalP 4.0: discriminating signal peptides from transmembrane regions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

The Strategies WDK: a graphical search interface and web development kit for functional genomics databases

23 August 2017

1 reference

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Differential expression analysis for sequence count data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

A prospective analysis of the Ab response to Plasmodium falciparum before and after a malaria season by protein microarray

23 August 2017

1 reference

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LeishCyc: a biochemical pathways database for Leishmania major.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

The generic genome browser: a building block for a model organism system database

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

GMAP and GSNAP for Genomic Sequence Alignment: Enhancements to Speed, Accuracy, and Functionality

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

Quantitative proteomics using SILAC: Principles, applications, and developments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210576

6 September 2017

Identifiers

DOI

10.1093/NAR/GKW1105

1 reference

journals/nar/AurrecoecheaBBB17

21 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

21 August 2017

PubMed publication ID

27903906

1 reference