Temporal SILAC-based quantitative proteomics identifies host factors involved in chikungunya virus replication. (Q38415017)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

title

Temporal SILAC-based quantitative proteomics identifies host factors involved in chikungunya virus replication (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

0 references

0 references

1 reference

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Emmely E Treffers

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Florine Scholte

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Matthias T Heemskerk

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Eric J Snijder

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Peter van Veelen

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

author name string

Ali Tas

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Myrthe N Van

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Arnoud H de Ru

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

publication date

22 April 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

number of pages

14

1 reference

based on heuristic

inferred from page(s)

published in

Proteomics

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

page(s)

2267-2280

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

issue

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

2 March 2020

293/ACE2

0 references

cites work

Chikungunya: a re-emerging virus

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

First cases of autochthonous dengue fever and chikungunya fever in France: from bad dream to reality!

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Infection with chikungunya virus in Italy: an outbreak in a temperate region

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

First case of locally acquired chikungunya is reported in US.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Understanding the alphaviruses: recent research on important emerging pathogens and progress towards their control.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Roles of nonstructural protein nsP2 and Alpha/Beta interferons in determining the outcome of Sindbis virus infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Inhibition of cell functions by RNA-virus infections

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Antiviral perspectives for chikungunya virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Systematic approaches towards the development of host-directed antiviral therapeutics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Virus-host interactomes--antiviral drug discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Global protein profiling studies of chikungunya virus infection identify different proteins but common biological processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Differential proteome analysis of Chikungunya virus-infected new-born mice tissues reveal implication of stress, inflammatory and apoptotic pathways in disease pathogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Characterization of chikungunya virus induced host response in a mouse model of viral myositis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Proteomic profiling of chikungunya virus-infected human muscle cells: reveal the role of cytoskeleton network in CHIKV replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Differential proteome analysis of chikungunya virus infection on host cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Proteomic analysis of chikungunya virus infected microgial cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Comprehensive proteomic analysis of white blood cells from chikungunya fever patients of different severities

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Proteomic profiling of serum samples from chikungunya-infected patients provides insights into host response

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Kinetic analysis of mouse brain proteome alterations following Chikungunya virus infection before and after appearance of clinical symptoms

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

The Old World and New World alphaviruses use different virus-specific proteins for induction of transcriptional shutoff

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

BLAST: at the core of a powerful and diverse set of sequence analysis tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

A mutation in human CMP-sialic acid hydroxylase occurred after the Homo-Pan divergence

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Cell division cycle 6, a mitotic substrate of polo-like kinase 1, regulates chromosomal segregation mediated by cyclin-dependent kinase 1 and separase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Deubiquitinase function of arterivirus papain-like protease 2 suppresses the innate immune response in infected host cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Characterization of synthetic Chikungunya viruses based on the consensus sequence of recent E1-226V isolates

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Universal sample preparation method for proteome analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Efficient fractionation and improved protein identification by peptide OFFGEL electrophoresis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Peptide separation with immobilized pI strips is an attractive alternative to in-gel protein digestion for proteome analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Andromeda: a peptide search engine integrated into the MaxQuant environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Global quantification of mammalian gene expression control

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Mutations conferring a noncytotoxic phenotype on chikungunya virus replicons compromise enzymatic properties of nonstructural protein 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Stress granule components G3BP1 and G3BP2 play a proviral role early in Chikungunya virus replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Functional processing and secretion of Chikungunya virus E1 and E2 glycoproteins in insect cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Efficient incorporation of a functional hyper-stable single-chain antibody fragment protein-IX fusion in the adenovirus capsid.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Innate recognition of viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Chikungunya virus induces IPS-1-dependent innate immune activation and protein kinase R-independent translational shutoff

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Function and regulation of Rnd proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Formation of nsP3-Specific Protein Complexes during Sindbis Virus Replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Phosphatidylinositol 3-kinase-, actin-, and microtubule-dependent transport of Semliki Forest Virus replication complexes from the plasma membrane to modified lysosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

RhoE inhibits 4E-BP1 phosphorylation and eIF4E function impairing cap-dependent translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

RNA helicase proteins as chaperones and remodelers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

A novel helicase-type protein in the nucleolus: protein NOH61

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Chikungunya virus capsid protein contains nuclear import and export signals

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

The capsid-binding nucleolar helicase DDX56 is important for infectivity of West Nile virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

The helicase activity of DDX56 is required for its role in assembly of infectious West Nile virus particles

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Distinct DDX DEAD-box RNA helicases cooperate to modulate the HIV-1 Rev function.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Polo-like kinase 1 is involved in hepatitis C virus replication by hyperphosphorylating NS5A

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Epstein-Barr virus nuclear antigen 2 disrupts mitotic checkpoint and causes chromosomal instability

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

PLK1 down-regulates parainfluenza virus 5 gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Mechanisms underlying Plk1 polo-box domain-mediated biological processes and their physiological significance

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Polo-like kinase 1 (PLK1) regulates interferon (IFN) induction by MAVS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Chikungunya virus nonstructural protein 2 inhibits type I/II interferon-stimulated JAK-STAT signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

The unique N terminus of the UbcH10 E2 enzyme controls the threshold for APC activation and enhances checkpoint regulation of the APC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Ubiquitin-conjugating enzyme UBE2C: molecular biology, role in tumorigenesis, and potential as a biomarker.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Evasion of the innate immune response: the Old World alphavirus nsP2 protein induces rapid degradation of Rpb1, a catalytic subunit of RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Structure of eukaryotic RNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

Quantitative temporal viromics: an approach to investigate host-pathogen interaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201400581

21 January 2018

Identifiers

DOI

10.1002/PMIC.201400581

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25764339%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

1 reference