Ribosomally synthesized and post-translationally modified peptide natural product discovery in the genomic era. (Q38928841)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

title

Ribosomally synthesized and post-translationally modified peptide natural product discovery in the genomic era (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

2

Wilfred A van der Donk

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

language of work or name

1 reference

2 March 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

Current Opinion in Chemical Biology

4 April 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

volume

38

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

page(s)

36-44

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

A new genome-mining tool redefines the lasso peptide biosynthetic landscape.

4 April 2020

cites work

1 reference

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Genomic charting of ribosomally synthesized natural product chemical space facilitates targeted mining

17 June 2018

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Cyclisation mechanisms in the biosynthesis of ribosomally synthesised and post-translationally modified peptides

17 June 2018

1 reference

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The evolution of genome mining in microbes - a review.

17 June 2018

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Old dogs and new tricks in antimicrobial discovery.

17 June 2018

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Insights into the Unique Phosphorylation of the Lasso Peptide Paeninodin.

17 June 2018

1 reference

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Discovery and Characterization of Bicereucin, an Unusual d-Amino Acid-Containing Mixed Two-Component Lantibiotic

17 June 2018

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Structural Characterization and Bioactivity Analysis of the Two-Component Lantibiotic Flv System from a Ruminant Bacterium

17 June 2018

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Biosynthetic investigation of phomopsins reveals a widespread pathway for ribosomal natural products in Ascomycetes

17 June 2018

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New Insights into the Biosynthetic Logic of Ribosomally Synthesized and Post-translationally Modified Peptide Natural Products

17 June 2018

1 reference

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Class of cyclic ribosomal peptide synthetic genes in filamentous fungi

17 June 2018

1 reference

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In Vitro Biosynthesis of the Core Scaffold of the Thiopeptide Thiomuracin

17 June 2018

1 reference

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Characterization of the Antimicrobial Peptide Penisin, a Class Ia Novel Lantibiotic from Paenibacillus sp. Strain A3.

17 June 2018

1 reference

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A novel family of cyclic oligopeptides derived from ribosomal peptide synthesis of an in planta-induced gene, gigA, in Epichloë endophytes of grasses

17 June 2018

1 reference

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The genomic landscape of ribosomal peptides containing thiazole and oxazole heterocycles

17 June 2018

1 reference

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Computational approaches to natural product discovery

17 June 2018

1 reference

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Minimum Information about a Biosynthetic Gene cluster.

17 June 2018

1 reference

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Legonaridin, a new member of linaridin RiPP from a Ghanaian Streptomyces isolate

17 June 2018

1 reference

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Distribution and Genetic Diversity of Bacteriocin Gene Clusters in Rumen Microbial Genomes

17 June 2018

1 reference

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Pinensins: the first antifungal lantibiotics

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Lasso peptides: an intriguing class of bacterial natural products

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Structure and biosynthesis of a macrocyclic peptide containing an unprecedented lysine-to-tryptophan crosslink

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Expanded natural product diversity revealed by analysis of lanthipeptide-like gene clusters in actinobacteria

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Peptide therapeutics: targeting the undruggable space

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Multicenter, randomized clinical trial to compare the safety and efficacy of LFF571 and vancomycin for Clostridium difficile infections

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Genome mining for ribosomally synthesized and post-translationally modified peptides (RiPPs) in anaerobic bacteria

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

A systematic analysis of biosynthetic gene clusters in the human microbiome reveals a common family of antibiotics.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters

17 June 2018

1 reference

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Cerecidins, novel lantibiotics from Bacillus cereus with potent antimicrobial activity

17 June 2018

1 reference

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Xanthomonins I-III: a new class of lasso peptides with a seven-residue macrolactam ring

17 June 2018

1 reference

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Thiopeptide antibiotics: retrospective and recent advances

17 June 2018

1 reference

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Microbial genome mining for accelerated natural products discovery: is a renaissance in the making?

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Metagenome mining reveals polytheonamides as posttranslationally modified ribosomal peptides

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

A mass spectrometry-guided genome mining approach for natural product peptidogenomics

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Natural products and ion channel pharmacology

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Gene family encoding the major toxins of lethal Amanita mushrooms

17 June 2018

1 reference

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BACTIBASE: a new web-accessible database for bacteriocin characterization

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Antimicrobial peptides: pore formers or metabolic inhibitors in bacteria?

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Seven enzymes create extraordinary molecular complexity in an uncultivated bacterium.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Cyclopeptide toxins of lethal amanitas: Compositions, distribution and phylogenetic implication

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

The Supersized Class III Lanthipeptide Stackepeptin Displays Motif Multiplication in the Core Peptide.

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Lasso peptides from proteobacteria: Genome mining employing heterologous expression and mass spectrometry

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

A phase I trial of intranasal Moli1901 for cystic fibrosis

22 August 2018

1 reference

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Technology: The $1,000 genome

22 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5474203

Unveiling the Biosynthetic Pathway of the Ribosomally Synthesized and Post-translationally Modified Peptide Ustiloxin B in Filamentous Fungi

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28260651

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The secondary metabolite bioinformatics portal: Computational tools to facilitate synthetic biology of secondary metabolite production.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28260651

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CBPA.2017.02.005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28260651%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference