Duplication and Adaptive Evolution of a Key Centromeric Protein in Mimulus, a Genus with Female Meiotic Drive (Q38992391)

8 September 2017

title

Duplication and Adaptive Evolution of a Key Centromeric Protein in Mimulus, a Genus with Female Meiotic Drive (English)

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8 September 2017

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4

Lila Fishman

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8 September 2017

Findley R Finseth

1

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8 September 2017

Yuzhu Dong

series ordinal

2

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8 September 2017

Arpiar Saunders

series ordinal

3

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8 September 2017

publication date

22 June 2015

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Molecular Biology and Evolution

8 September 2017

published in

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8 September 2017

volume

32

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8 September 2017

issue

10

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8 September 2017

page(s)

2694-2706

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Patterns of evolution in western North American Mimulus (Phrymaceae).

8 September 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

AFLP PHYLOGENY OF MIMULUS SECTION ERYTHRANTHE AND THE EVOLUTION OF HUMMINGBIRD POLLINATION

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

A maximum likelihood method for detecting functional divergence at individual codon sites, with application to gene family evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Trimmomatic: a flexible trimmer for Illumina sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Emerging roles for centromeres in meiosis I chromosome segregation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Centromere strength provides the cell biological basis for meiotic drive and karyotype evolution in mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Gene expression plasticity resulting from parental leaf damage in Mimulus guttatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Adaptive evolution of the histone fold domain in centromeric histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

jModelTest 2: more models, new heuristics and parallel computing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Recurrent loss of CenH3 is associated with independent transitions to holocentricity in insects

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Absence of positive selection on centromeric histones in Tetrahymena suggests unsuppressed centromere: drive in lineages lacking male meiosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Centromere-associated meiotic drive and female fitness variation in Mimulus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Centromere-associated female meiotic drive entails male fitness costs in monkeyflowers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

A novel meiotic drive locus almost completely distorts segregation in mimulus (monkeyflower) hybrids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Comparative linkage maps suggest that fission, not polyploidy, underlies near-doubling of chromosome number within monkeyflowers (Mimulus; Phrymaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

The standing pool of genomic structural variation in a natural population of Mimulus guttatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Distinguishing among evolutionary models for the maintenance of gene duplicates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Fine-scale variation in meiotic recombination in Mimulus inferred from population shotgun sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

The centromere paradox: stable inheritance with rapidly evolving DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Centromeres: selfish drivers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Mislocalization of the Drosophila centromere-specific histone CID promotes formation of functional ectopic kinetochores

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Lineage-specific adaptive evolution of the centromeric protein CENH3 in diploid and allotetraploid Oryza species

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Early disruption of centromeric chromatin organization in centromere protein A (Cenpa) null mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

The evolution of functionally novel proteins after gene duplication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

The evolution of gene duplications: classifying and distinguishing between models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Structure and genomic organization of centromeric repeats in Arabidopsis species

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Duplication of centromeric histone H3 (HTR12) gene in Arabidopsis halleri and A. lyrata, plant species with multiple centromeric satellite sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Clustal W and Clustal X version 2.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Chromatin immunoprecipitation cloning reveals rapid evolutionary patterns of centromeric DNA in Oryza species

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Knockdown of CENH3 in Arabidopsis reduces mitotic divisions and causes sterility by disturbed meiotic chromosome segregation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Loading of Arabidopsis centromeric histone CENH3 occurs mainly during G2 and requires the presence of the histone fold domain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Fast and accurate short read alignment with Burrows-Wheeler transform

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Naturally occurring differences in CENH3 affect chromosome segregation in zygotic mitosis of hybrids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Genetic conflicts during meiosis and the evolutionary origins of centromere complexity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Conflict begets complexity: the evolution of centromeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Major evolutionary transitions in centromere complexity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Recurrent evolution of DNA-binding motifs in the Drosophila centromeric histone

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Differential role of CENP-A in the segregation of holocentric C. elegans chromosomes during meiosis and mitosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

HCP-4, a CENP-C-like protein in Caenorhabditis elegans, is required for resolution of sister centromeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Recognition of A. thaliana centromeres by heterologous CENH3 requires high similarity to the endogenous protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Stable barley chromosomes without centromeric repeats.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Stretching the rules: monocentric chromosomes with multiple centromere domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Centromeres Off the Hook: Massive Changes in Centromere Size and Structure Following Duplication of CenH3 Gene in Fabeae Species

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Functional analysis of kinetochore assembly in Caenorhabditis elegans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Nonrandom segregation during meiosis: the unfairness of females

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Loss of centromeric histone H3 (CENH3) from centromeres precedes uniparental chromosome elimination in interspecific barley hybrids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Adaptive evolution of foundation kinetochore proteins in primates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Crystal structure of the human centromeric nucleosome containing CENP-A

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Centromeric localization and adaptive evolution of an Arabidopsis histone H3 variant

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Centromere targeting element within the histone fold domain of Cid.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Three potato centromeres are associated with distinct haplotypes with or without megabase-sized satellite repeat arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

An improved likelihood ratio test for detecting site-specific functional divergence among clades of protein-coding genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Aneuploidy: instigator and inhibitor of tumorigenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

PAML 4: phylogenetic analysis by maximum likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Codon-substitution models to detect adaptive evolution that account for heterogeneous selective pressures among site classes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Bayes empirical bayes inference of amino acid sites under positive selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Change of positive selection pressure on HIV-1 envelope gene inferred by early and recent samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Characterization of two CENH3 genes and their roles in wheat evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Evidence for centromere drive in the holocentric chromosomes of Caenorhabditis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

Centromeric retroelements and satellites interact with maize kinetochore protein CENH3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

The MaSuRCA genome assembler

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV145

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MSV145

1 reference

8 September 2017

1 reference