Proteomic Analysis of Unbounded Cellular Compartments: Synaptic Clefts (Q39348340)

11 September 2017

Proteomic Analysis of Unbounded Cellular Compartments: Synaptic Clefts (English)

1 reference

SLIT and NTRK like family member 3

11 September 2017

1 reference

Leucine rich repeat transmembrane neuronal 2

GOA release 2020-03-11

1 reference

Leucine rich repeat transmembrane neuronal 1

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

Philipp S Stawski

2

0 references

author name string

Ken H Loh

1

1 reference

11 September 2017

Austin S Draycott

3

1 reference

11 September 2017

Namrata D Udeshi

4

1 reference

11 September 2017

Emily K Lehrman

5

1 reference

11 September 2017

Daniel K Wilton

6

1 reference

11 September 2017

Tanya Svinkina

7

1 reference

11 September 2017

Thomas J Deerinck

8

1 reference

11 September 2017

Mark H Ellisman

9

1 reference

11 September 2017

Beth Stevens

10

1 reference

11 September 2017

Steven A Carr

11

1 reference

11 September 2017

Alice Y Ting

12

1 reference

11 September 2017

language of work or name

English

0 references

publication date

1 August 2016

1 reference

11 September 2017

1 reference

11 September 2017

166

1 reference

11 September 2017

5

1 reference

11 September 2017

1295-1307.e21

1 reference

Complement and microglia mediate early synapse loss in Alzheimer mouse models.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Spatially resolved proteomic mapping in living cells with the engineered peroxidase APEX2.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Proteomic mapping in live Drosophila tissues using an engineered ascorbate peroxidase

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Deep, Quantitative Coverage of the Lysine Acetylome Using Novel Anti-acetyl-lysine Antibodies and an Optimized Proteomic Workflow

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Directed evolution of APEX2 for electron microscopy and proximity labeling.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

A combined transgenic proteomic analysis and regulated trafficking of neuroligin-2.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Proteomic mapping of the human mitochondrial intermembrane space in live cells via ratiometric APEX tagging.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Proteomic screening of glutamatergic mouse brain synaptosomes isolated by fluorescence activated sorting

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Interaction between autism-linked MDGAs and neuroligins suppresses inhibitory synapse development

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

MDGAs interact selectively with neuroligin-2 but not other neuroligins to regulate inhibitory synapse development

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Comparative study of human and mouse postsynaptic proteomes finds high compositional conservation and abundance differences for key synaptic proteins

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

The biochemical anatomy of cortical inhibitory synapses

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Astrocyte glypicans 4 and 6 promote formation of excitatory synapses via GluA1 AMPA receptors

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Clustered dynamics of inhibitory synapses and dendritic spines in the adult neocortex.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Selective control of inhibitory synapse development by Slitrk3-PTPδ trans-synaptic interaction.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

SynaptomeDB: an ontology-based knowledgebase for synaptic genes

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

An unbiased expression screen for synaptogenic proteins identifies the LRRTM protein family as synaptic organizers

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

ErbB4-neuregulin signaling modulates synapse development and dendritic arborization through distinct mechanisms

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

A mitochondrial protein compendium elucidates complex I disease biology

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Molecular anatomy of a trafficking organelle

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

CSMD1 is a novel multiple domain complement-regulatory protein highly expressed in the central nervous system and epithelial tissues

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Neurexins induce differentiation of GABA and glutamate postsynaptic specializations via neuroligins

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Neuroligin 2 is exclusively localized to inhibitory synapses

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Electroporation and RNA interference in the rodent retina in vivo and in vitro

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Roles and rules of kainate receptors in synaptic transmission.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Germline transmission and tissue-specific expression of transgenes delivered by lentiviral vectors

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

A new mathematical model for relative quantification in real-time RT-PCR

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Down-regulation of the macrophage lineage through interaction with OX2 (CD200)

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

In vivo enzymatic protein biotinylation

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Neuroligin 1 is a postsynaptic cell-adhesion molecule of excitatory synapses

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Molecular profiling of synaptic vesicle docking sites reveals novel proteins but few differences between glutamatergic and GABAergic synapses

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Glial contamination of synaptosomal fractions

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

The complement control-related genes CSMD1 and CSMD2 associate to schizophrenia.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Alternative splicing controls selective trans-synaptic interactions of the neuroligin-neurexin complex.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Distinct localization of GABA(B) receptors relative to synaptic sites in the rat cerebellum and ventrobasal thalamus

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5167540

Selective Proteomic Proximity Labeling Assay Using Tyramide (SPPLAT): A Quantitative Method for the Proteomic Analysis of Localized Membrane-Bound Protein Clusters

21 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27565350

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELL.2016.07.041

1 reference

11 September 2017

1 reference

11 September 2017

PubMed publication ID

27565350

1 reference