The bulge region of HIV-1 TAR RNA binds metal ions in solution. (Q39698136)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12364603%20AND%20SRC:MED&resulttype=core&format=json

13 December 2019

title

The bulge region of HIV-1 TAR RNA binds metal ions in solution (English)

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13 December 2019

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1

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13 December 2019

Zofia Gdaniec

2

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13 December 2019

Ryszard Adamiak

6

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13 December 2019

author name string

Artur Fischer

3

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13 December 2019

Tomasz Grabarkiewicz

4

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13 December 2019

Lukasz Bielecki

5

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13 December 2019

language of work or name

English

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publication date

1 October 2002

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13 December 2019

published in

Nucleic Acids Research

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13 December 2019

volume

30

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13 December 2019

issue

19

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13 December 2019

page(s)

4241-4249

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describes a project that uses

13 December 2019

ImageQuant

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11 June 2022

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An inhibitor of the Tat/TAR RNA interaction that effectively suppresses HIV-1 replication

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Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge

14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

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The bend in RNA created by the trans-activation response element bulge of human immunodeficiency virus is straightened by arginine and by Tat-derived peptide

14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

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25 September 2017

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Iron regulatory element and internal loop/bulge structure for ferritin mRNA studied by cobalt(III) hexammine binding, molecular modeling, and NMR spectroscopy

15 June 2018

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15 June 2018

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Concerted motions in HIV-1 TAR RNA may allow access to bound state conformations: RNA dynamics from NMR residual dipolar couplings.

15 June 2018

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Nonenzymatic cleavage of oligoribonucleotides.

20 August 2018

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Structural equilibria in RNA as revealed by 19F NMR.

20 August 2018

1 reference

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Metal ion probing of rRNAs: evidence for evolutionarily conserved divalent cation binding pockets.

20 August 2018

1 reference

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Docking of cationic antibiotics to negatively charged pockets in RNA folds

20 August 2018

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12 December 2020

Characterization of the solution conformations of unbound and Tat peptide-bound forms of HIV-1 TAR RNA

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12 December 2020

Does 29-mer RNA hairpin of the HIV-1 TAR RNA sequence bind magnesium? 19F-NMR and modelling studies

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12 December 2020

Conformation of the TAR RNA-Arginine Complex by NMR Spectroscopy

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12 December 2020

Correlations between fluorine-19 nuclear magnetic resonance chemical shift and the secondary and tertiary structure of 5-fluorouracil-substituted tRNA

1 reference

12 December 2020

Metallobiochemistry of RNA. Co(NH3)6(3+) as a probe for Mg2+(aq) binding sites

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12 December 2020

Solution structures of 5-fluorouracil-substituted RNA duplexes containing G-U wobble base pairs

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12 December 2020

A magnesium ion core at the heart of a ribozyme domain

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12 December 2020

Exploration of metal ion binding sites in RNA folds by Brownian-dynamics simulations

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12 December 2020

Identifiers

DOI

10.1093/NAR/GKF541

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12364603%20AND%20SRC:MED&resulttype=core&format=json

13 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12364603%20AND%20SRC:MED&resulttype=core&format=json

13 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12364603%20AND%20SRC:MED&resulttype=core&format=json