The ITS2 Database III--sequences and structures for phylogeny (Q42067439)

16 October 2017

The ITS2 Database III--sequences and structures for phylogeny (English)

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16 October 2017

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3

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16 October 2017

Roland Schwarz

6

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Frank Förster

object named as

Frank Förster

2

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Matthias Wolf

8

object named as

Matthias Wolf

1 reference

16 October 2017

9

Jörg Schultz

1 reference

16 October 2017

Christian Koetschan

1

1 reference

16 October 2017

Tina Schleicher

4

1 reference

16 October 2017

Benjamin Ruderisch

5

1 reference

16 October 2017

Tobias Müller

7

1 reference

16 October 2017

language of work or name

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17 November 2009

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16 October 2017

Nucleic Acids Research

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16 October 2017

38

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16 October 2017

Database issue

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16 October 2017

D275-9

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Modelling cross-hybridization on phylogenetic DNA microarrays increases the detection power of closely related species

16 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

ITS2 sequence-structure analysis in phylogenetics: a how-to manual for molecular systematics

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

PseudoViewer3: generating planar drawings of large-scale RNA structures with pseudoknots

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

5.8S-28S rRNA interaction and HMM-based ITS2 annotation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

UNAFold: software for nucleic acid folding and hybridization

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

5 June 2018

Distinguishing species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

Pan-eukaryote ITS2 homologies revealed by RNA secondary structure

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

ITS2 sequences as barcodes for identifying and analyzing spider mites (Acari: Tetranychidae).

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

ITS2 is a double-edged tool for eukaryote evolutionary comparisons

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

Profile hidden Markov models

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

Barcoding of diatoms: nuclear encoded ITS revisited

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

ProfDistS: (profile-) distance based phylogeny on sequence--structure alignments

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

Using ITS2 secondary structure to create species-specific oligonucleotide probes for fungi

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

CBCAnalyzer: inferring phylogenies based on compensatory base changes in RNA secondary structures.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

Displaying the information contents of structural RNA alignments: the structure logos.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808966

17 August 2018

Identifiers

DOI

10.1093/NAR/GKP966

1 reference

journals/nar/KoetschanFKSRSMWS10

16 October 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

16 October 2017

PubMed publication ID

19920122

1 reference