Modeling dynamic functional relationship networks and application to ex vivo human erythroid differentiation (Q42287793)

19 October 2017

Modeling dynamic functional relationship networks and application to ex vivo human erythroid differentiation (English)

1 reference

19 October 2017

0 references

6

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2 June 2020

author name string

Fan Zhu

1

1 reference

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2 June 2020

Lihong Shi

2

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2 June 2020

Hongdong Li

3

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2 June 2020

Ridvan Eksi

4

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2 June 2020

James Douglas Engel

5

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2 June 2020

language of work or name

English

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publication date

12 August 2014

1 reference

19 October 2017

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2 June 2020

volume

30

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2 June 2020

issue

23

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2 June 2020

page(s)

3325-3333

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Predicting dynamic signaling network response under unseen perturbations

2 June 2020

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Biased, non-equivalent gene-proximal and -distal binding motifs of orphan nuclear receptor TR4 in primary human erythroid cells

26 October 2017

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26 October 2017

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Identification of stage-specific genes associated with lupus nephritis and response to remission induction in (NZB × NZW)F1 and NZM2410 mice.

26 October 2017

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26 October 2017

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26 October 2017

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26 October 2017

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26 October 2017

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26 October 2017

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26 October 2017

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26 October 2017

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26 October 2017

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Rewiring of PDZ domain-ligand interaction network contributed to eukaryotic evolution

26 October 2017

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26 October 2017

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Genome-wide analysis of simultaneous GATA1/2, RUNX1, FLI1, and SCL binding in megakaryocytes identifies hematopoietic regulators.

26 October 2017

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Prioritizing candidate disease genes by network-based boosting of genome-wide association data.

26 October 2017

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Integrated functional networks of process, tissue, and developmental stage specific interactions in Arabidopsis thaliana

26 October 2017

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Rewiring of genetic networks in response to DNA damage.

26 October 2017

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Functional genomics complements quantitative genetics in identifying disease-gene associations

26 October 2017

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The BioGRID Interaction Database: 2011 update

26 October 2017

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Differential expression analysis for sequence count data

26 October 2017

1 reference

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MINT, the molecular interaction database: 2009 update

26 October 2017

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Global prediction of tissue-specific gene expression and context-dependent gene networks in Caenorhabditis elegans

26 October 2017

1 reference

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Exploring the human genome with functional maps

26 October 2017

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26 October 2017

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WGCNA: an R package for weighted correlation network analysis

26 October 2017

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A genomewide functional network for the laboratory mouse

26 October 2017

1 reference

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A critical assessment of Mus musculus gene function prediction using integrated genomic evidence

26 October 2017

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Genetics of gene expression and its effect on disease

26 October 2017

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Erythroid Krüppel-like factor directly activates the basic Krüppel-like factor gene in erythroid cells.

26 October 2017

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FoxOs are critical mediators of hematopoietic stem cell resistance to physiologic oxidative stress

26 October 2017

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Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

26 October 2017

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A scalable method for integration and functional analysis of multiple microarray datasets

26 October 2017

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Integrating genetic and network analysis to characterize genes related to mouse weight

26 October 2017

1 reference

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A general framework for weighted gene co-expression network analysis

26 October 2017

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MPact: the MIPS protein interaction resource on yeast

26 October 2017

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Expansion of the BioCyc collection of pathway/genome databases to 160 genomes

26 October 2017

1 reference

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Transcriptional regulation of the SCL locus: identification of an enhancer that targets the primitive erythroid lineage in vivo

26 October 2017

1 reference

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GATA1 function, a paradigm for transcription factors in hematopoiesis

26 October 2017

1 reference

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GATA1 in normal and malignant hematopoiesis

26 October 2017

1 reference

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Ex vivo generation of fully mature human red blood cells from hematopoietic stem cells

26 October 2017

1 reference

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The Biomolecular Interaction Network Database and related tools 2005 update

26 October 2017

1 reference

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Hembase: browser and genome portal for hematology and erythroid biology

26 October 2017

1 reference

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The KEGG resource for deciphering the genome

26 October 2017

1 reference

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HLM/OSBP2 is expressed in chronic myeloid leukemia

26 October 2017

1 reference

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Rh-RhAG/ankyrin-R, a new interaction site between the membrane bilayer and the red cell skeleton, is impaired by Rh(null)-associated mutation

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4296147

Rewiring MAP kinase pathways using alternative scaffold assembly mechanisms

26 October 2017

1 reference

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Transcriptional regulation of erythropoiesis: an affair involving multiple partners

26 October 2017

1 reference

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Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

26 October 2017

1 reference

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The biology of the mammalian Krüppel-like family of transcription factors

26 October 2017

1 reference

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Gene ontology: tool for the unification of biology

26 October 2017

1 reference

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Expression of FLT3 receptor and response to FLT3 ligand by leukemic cells

26 October 2017

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Erythroid differentiation in chimaeric mice blocked by a targeted mutation in the gene for transcription factor GATA-1

26 October 2017

1 reference

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A global role for KLF1 in erythropoiesis revealed by ChIP-seq in primary erythroid cells

26 October 2017

1 reference

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A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans.

29 May 2018

1 reference

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Transcriptional regulatory network analysis of developing human erythroid progenitors reveals patterns of coregulation and potential transcriptional regulators.

17 August 2018

1 reference

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Multipotential differentiation ability of GATA-1-null erythroid-committed cells

17 August 2018

1 reference

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Global architecture of genetic interactions on the protein network.

17 August 2018

1 reference

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A probabilistic functional network of yeast genes

17 August 2018

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12 December 2020

Purification of an active proteolytic fragment of the membrane attachment site for human erythrocyte spectrin

1 reference

12 December 2020

Human FLT3/FLK2 receptor tyrosine kinase is expressed at the surface of normal and malignant hematopoietic cells

1 reference

12 December 2020

Identification of HIF2alpha as an important STAT5 target gene in human hematopoietic stem cells

1 reference

12 December 2020

10.1093/BIOINFORMATICS/BTU542

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25115705%20AND%20SRC:MED&resulttype=core&format=json

journals/bioinformatics/ZhuSLEEG14

2 June 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25115705%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

PubMed publication ID

25115705

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25115705%20AND%20SRC:MED&resulttype=core&format=json