Single-molecule detection of 5-hydroxymethylcytosine in DNA through chemical modification and nanopore analysis (Q45391971)

14 December 2017

Single-molecule detection of 5-hydroxymethylcytosine in DNA through chemical modification and nanopore analysis (English)

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14 December 2017

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14 December 2017

Hagan Bayley

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author name string

Lingzhi Gong

series ordinal

2

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PubMed ID

23559386

14 December 2017

language of work or name

English

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publication date

4 April 2013

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Angewandte Chemie International Edition

14 December 2017

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volume

52

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14 December 2017

16

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14 December 2017

4350-4355

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Perceptions of epigenetics

14 December 2017

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Cancer epigenetics: modifications, screening, and therapy

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The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

21 January 2018

1 reference

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Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

21 January 2018

1 reference

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The discovery of 5-formylcytosine in embryonic stem cell DNA.

21 January 2018

1 reference

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Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

21 January 2018

1 reference

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Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

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Genome-wide distribution of 5-formylcytosine in embryonic stem cells is associated with transcription and depends on thymine DNA glycosylase

21 January 2018

1 reference

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Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells

21 January 2018

1 reference

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MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

5-Hydroxymethylcytosine, the sixth base of the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

Human DNA methylomes at base resolution show widespread epigenomic differences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing

21 January 2018

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Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine

21 January 2018

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https://api.crossref.org/works/10.1002%2FANIE.201300413

Reaction of bisulfite with the 5-hydroxymethyl group in pyrimidines and in phage DNAs

21 January 2018

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Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

21 January 2018

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https://api.crossref.org/works/10.1002%2FANIE.201300413

Sensitive enzymatic quantification of 5-hydroxymethylcytosine in genomic DNA

21 January 2018

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Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine.

21 January 2018

1 reference

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Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine

21 January 2018

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Methyltransferase-directed derivatization of 5-hydroxymethylcytosine in DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

Direct detection of DNA methylation during single-molecule, real-time sequencing

21 January 2018

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https://api.crossref.org/works/10.1002%2FANIE.201300413

Sequencing single molecules of DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

The potential and challenges of nanopore sequencing

21 January 2018

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https://api.crossref.org/works/10.1002%2FANIE.201300413

Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision

21 January 2018

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Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

Recognizing a single base in an individual DNA strand: a step toward DNA sequencing in nanopores

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

Single-nucleotide discrimination in immobilized DNA oligonucleotides with a biological nanopore

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

Nucleotide discrimination with DNA immobilized in the MspA nanopore

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

Identification of epigenetic DNA modifications with a protein nanopore

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1 reference

https://api.crossref.org/works/10.1002%2FANIE.201300413

Evidence from 18O exchange studies for an exocyclic methylene intermediate in the reaction catalyzed by T4 deoxycytidylate hydroxymethylase

21 January 2018

1 reference

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The catalytic mechanism and structure of thymidylate synthase

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https://api.crossref.org/works/10.1002%2FANIE.201300413

Direct determination of thiol pKa by isothermal titration microcalorimetry

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Tuning the Cavity of Cyclodextrins: Altered Sugar Adaptors in Protein Pores

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Mechanistic Studies on Thiaminase I. 3. Stereochemistry of the Thiaminase I and the Bisulfite-Catalyzed Degradation of Chiral Monodeuteriothiamin

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Novel chemical method for the preparation of nucleic acids for nonisotopic hybridization.

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Role of bisulfite in the deamination and the hydrogen isotope exchange of cytidylic acid

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Addition of sodium bisulfite to uracil and to cytosine

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DNA methylation: Bisulphite modification and analysis

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Identifiers

DOI

10.1002/ANIE.201300413

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14 December 2017

1 reference

PubMed ID

23559386