Plant upstream ORFs can trigger nonsense-mediated mRNA decay in a size-dependent manner. (Q47175773)

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4 February 2020

title

Plant upstream ORFs can trigger nonsense-mediated mRNA decay in a size-dependent manner (English)

1 reference

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4 February 2020

3

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4 February 2020

author name string

Tünde Nyikó

1

1 reference

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4 February 2020

Boglárka Sonkoly

2

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4 February 2020

Anna Hangyáné Benkovics

4

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4 February 2020

Dániel Silhavy

5

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4 February 2020

publication date

4 August 2009

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4 February 2020

number of pages

12

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inferred from page(s)

published in

Plant Molecular Biology

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4 February 2020

volume

71

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4 February 2020

issue

4-5

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4 February 2020

page(s)

367-378

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https://scigraph.springernature.com/pub.10.1007/s11103-009-9528-4

4 February 2020

exact match

0 references

cites work

Characterization of cis-acting sequences and decay intermediates involved in nonsense-mediated mRNA turnover

1 reference

Crossref

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Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes

21 January 2018

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12 December 2020

Execution of nonsense-mediated mRNA decay: what defines a substrate?

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12 December 2020

Regulation of translation via mRNA structure in prokaryotes and eukaryotes

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Proline residues at the C terminus of nascent chains induce SsrA tagging during translation termination

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Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

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12 December 2020

Messenger RNA regulation: to translate or to degrade

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12 December 2020

Computational modeling and experimental analysis of nonsense-mediated decay in yeast

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12 December 2020

UPF1 is required for nonsense-mediated mRNA decay (NMD) and RNAi in Arabidopsis.

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12 December 2020

Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay

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12 December 2020

Evolutionary conservation suggests a regulatory function of AUG triplets in 5'-UTRs of eukaryotic genes

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12 December 2020

Translation repression by GLD-1 protects its mRNA targets from nonsense-mediated mRNA decay in C. elegans

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12 December 2020

Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs

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12 December 2020

Pushing the limits of the scanning mechanism for initiation of translation

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12 December 2020

Virus-induced gene silencing in tomato

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12 December 2020

The RNA binding protein Pub1 modulates the stability of transcripts containing upstream open reading frames

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12 December 2020

Both introns and long 3'-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants

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12 December 2020

Nonsense-mediated mRNA decay (NMD) silences the accumulation of aberrant trypsin proteinase inhibitor mRNA in Nicotiana attenuata.

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12 December 2020

Conserved upstream open reading frames in higher plants

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12 December 2020

CBP80 promotes interaction of Upf1 with Upf2 during nonsense-mediated mRNA decay in mammalian cells.

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12 December 2020

The mammalian nonsense-mediated mRNA decay pathway: to decay or not to decay! Which players make the decision?

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12 December 2020

SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells

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12 December 2020

A viral protein suppresses RNA silencing and binds silencing-generated, 21- to 25-nucleotide double-stranded RNAs

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12 December 2020

Comparative genomic analysis of novel conserved peptide upstream open reading frames in Drosophila melanogaster and other dipteran species

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12 December 2020

Downstream control of upstream open reading frames

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12 December 2020

The multiple lives of NMD factors: balancing roles in gene and genome regulation

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12 December 2020

Stability of plant mRNAs depends on the length of the 3'-untranslated region.

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12 December 2020

Nonsense-mediated messenger RNA decay is initiated by endonucleolytic cleavage in Drosophila

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12 December 2020

The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions

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12 December 2020

Stop making nonSense: the C. elegans smg genes

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12 December 2020

Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis.

1 reference

12 December 2020

The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay

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12 December 2020

An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3'-->5' degradation

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12 December 2020

SMG7 is a 14-3-3-like adaptor in the nonsense-mediated mRNA decay pathway

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12 December 2020

Inter-kingdom conservation of mechanism of nonsense-mediated mRNA decay

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12 December 2020

Proximity of the poly(A)-binding protein to a premature termination codon inhibits mammalian nonsense-mediated mRNA decay

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12 December 2020

Technical Advance. Tobacco rattle virus as a vector for analysis of gene function by silencing

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12 December 2020

UPF3 suppresses aberrant spliced mRNA in Arabidopsis

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12 December 2020

The lba1 mutation of UPF1 RNA helicase involved in nonsense-mediated mRNA decay causes pleiotropic phenotypic changes and altered sugar signalling in Arabidopsis

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12 December 2020

Context analysis of termination codons in mRNA that are recognized by plant NMD

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12 December 2020

Kill the messenger: mRNA decay and plant development

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12 December 2020

Efficient virus-induced gene silencing in roots using a modified tobacco rattle virus vector

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12 December 2020

Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CBP20

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12 December 2020

SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan

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12 December 2020

The canonical UPF1-dependent nonsense-mediated mRNA decay is inhibited in transcripts carrying a short open reading frame independent of sequence context

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12 December 2020

The nuclear cap-binding protein complex is not essential for nonsense-mediated mRNA decay (NMD) in plants

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12 December 2020

Recognition of nonsense mRNA: towards a unified model

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12 December 2020

Evidence that translation reinitiation abrogates nonsense-mediated mRNA decay in mammalian cells

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12 December 2020

Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise

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12 December 2020

NMD: multitasking between mRNA surveillance and modulation of gene expression

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12 December 2020

mRNA sequence features that contribute to translational regulation in Arabidopsis

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12 December 2020