Creative deaminases, self-inflicted damage, and genome evolution (Q47290459)

13 January 2018

title

Creative deaminases, self-inflicted damage, and genome evolution (English)

1 reference

13 January 2018

author

Silvestro G. Conticello

object named as

Silvestro G Conticello

series ordinal

1

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language of work or name

English

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publication date

1 September 2012

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13 January 2018

Annals of the New York Academy of Sciences

published in

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13 January 2018

volume

1267

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13 January 2018

page(s)

79-85

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13 January 2018

DNA deamination in immunity: AID in the context of its APOBEC relatives.

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21 January 2018

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Insights into the B cell specific process of immunoglobulin class switch recombination

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APOBEC proteins and intrinsic resistance to HIV-1 infection

21 January 2018

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21 January 2018

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Novel role for RNA-binding protein CUGBP2 in mammalian RNA editing. CUGBP2 modulates C to U editing of apolipoprotein B mRNA by interacting with apobec-1 and ACF, the apobec-1 complementation factor

21 January 2018

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Deficiency in APOBEC2 leads to a shift in muscle fiber type, diminished body mass, and myopathy

21 January 2018

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Activation-induced cytidine deaminase (AID) deficiency causes the autosomal recessive form of the Hyper-IgM syndrome (HIGM2)

21 January 2018

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Apolipoprotein B mRNA-editing protein induces hepatocellular carcinoma and dysplasia in transgenic animals

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Role of AID in tumorigenesis

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Chromosomal location, cloning and nucleotide sequence of the Bacillus subtilis cdd gene encoding cytidine/deoxycytidine deaminase

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Cytidine deaminase. The 2.3 A crystal structure of an enzyme: transition-state analog complex

21 January 2018

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Structures of dCTP deaminase from Escherichia coli with bound substrate and product: reaction mechanism and determinants of mono- and bifunctionality for a family of enzymes

21 January 2018

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An adenosine deaminase that generates inosine at the wobble position of tRNAs

21 January 2018

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tadA, an essential tRNA-specific adenosine deaminase from Escherichia coli

21 January 2018

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Tad1p, a yeast tRNA-specific adenosine deaminase, is related to the mammalian pre-mRNA editing enzymes ADAR1 and ADAR2.

21 January 2018

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RNA editing by base deamination: more enzymes, more targets, new mysteries

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Functions and regulation of RNA editing by ADAR deaminases

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New antiviral pathway that mediates hepatitis C virus replicon interferon sensitivity through ADAR1

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Editing of HIV-1 RNA by the double-stranded RNA deaminase ADAR1 stimulates viral infection

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The AID/APOBEC family of nucleic acid mutators.

21 January 2018

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An adenosine-to-inosine tRNA-editing enzyme that can perform C-to-U deamination of DNA.

21 January 2018

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Specific expression of activation-induced cytidine deaminase (AID), a novel member of the RNA-editing deaminase family in germinal center B cells

21 January 2018

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Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme

21 January 2018

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Evolution of the AID/APOBEC family of polynucleotide (deoxy)cytidine deaminases.

21 January 2018

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Altering the spectrum of immunoglobulin V gene somatic hypermutation by modifying the active site of AID.

21 January 2018

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Evolution and diversification of lamprey antigen receptors: evidence for involvement of an AID-APOBEC family cytosine deaminase

21 January 2018

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VLR-based adaptive immunity

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Diversification of Ig superfamily genes in an invertebrate

21 January 2018

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Analysis of reptilian APOBEC1 suggests that RNA editing may not be its ancestral function

21 January 2018

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Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein

21 January 2018

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Retroviral restriction by APOBEC proteins

21 January 2018

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Host restriction of HIV-1 by APOBEC3 and viral evasion through Vif.

21 January 2018

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Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif

21 January 2018

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Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G

21 January 2018

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The artiodactyl APOBEC3 innate immune repertoire shows evidence for a multi-functional domain organization that existed in the ancestor of placental mammals

21 January 2018

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Guidelines for naming nonprimate APOBEC3 genes and proteins

21 January 2018

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Apobec3 encodes Rfv3, a gene influencing neutralizing antibody control of retrovirus infection

21 January 2018

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Mouse APOBEC3 restricts friend leukemia virus infection and pathogenesis in vivo

21 January 2018

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The AKV murine leukemia virus is restricted and hypermutated by mouse APOBEC3.

21 January 2018

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The APOBEC3 cytidine deaminases: an innate defensive network opposing exogenous retroviruses and endogenous retroelements

21 January 2018

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APOBEC3A is a potent inhibitor of adeno-associated virus and retrotransposons

21 January 2018

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APOBEC3 proteins mediate the clearance of foreign DNA from human cells

21 January 2018

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APOBEC3G cytidine deaminase inhibits retrotransposition of endogenous retroviruses.

21 January 2018

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Molecular cloning of an apolipoprotein B messenger RNA editing protein

21 January 2018

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The neurofibromatosis type I messenger RNA undergoes base-modification RNA editing

21 January 2018

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https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Transcriptome-wide sequencing reveals numerous APOBEC1 mRNA-editing targets in transcript 3' UTRs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

An AU-rich sequence element (UUUN[A/U]U) downstream of the edited C in apolipoprotein B mRNA is a high-affinity binding site for Apobec-1: binding of Apobec-1 to this motif in the 3' untranslated region of c-myc increases mRNA stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: implications for epigenetic reprogramming

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Murine APOBEC1 is a powerful mutator of retroviral and cellular RNA in vitro and in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Human APOBEC1 cytidine deaminase edits HBV DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

APOBEC1-mediated editing and attenuation of herpes simplex virus 1 DNA indicate that neurons have an antiviral role during herpes simplex encephalitis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

RNA editing enzyme APOBEC1 and some of its homologs can act as DNA mutators

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

The role of activation-induced deaminase in antibody diversification and chromosome translocations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

AID is required for germinal center-derived lymphomagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

APOBEC3A can activate the DNA damage response and cause cell-cycle arrest

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Somatic hypermutation of human mitochondrial and nuclear DNA by APOBEC3 cytidine deaminases, a pathway for DNA catabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Preaching about the converted: how meiotic gene conversion influences genomic diversity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Adaptive radiation of venomous marine snail lineages and the accelerated evolution of venom peptide genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Three-dimensional architecture of the IgH locus facilitates class switch recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

Codon bias targets mutation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1749-6632.2012.06614.X

10.1111/J.1749-6632.2012.06614.X

21 January 2018

Identifiers

DOI

1 reference

13 January 2018

PubMed ID

22954220

1 reference

13 January 2018