Prediction of protein functional residues from sequence by probability density estimation. (Q50659156)

17 March 2018

title

Prediction of protein functional residues from sequence by probability density estimation. (English)

1 reference

17 March 2018

author

Johannes Söding

series ordinal

3

1 reference

17 March 2018

author name string

J D Fischer

series ordinal

1

1 reference

17 March 2018

C E Mayer

series ordinal

2

1 reference

17 March 2018

language of work or name

English

0 references

publication date

2 January 2008

1 reference

17 March 2018

number of pages

8

1 reference

based on heuristic

inferred from page(s)

published in

Bioinformatics

1 reference

17 March 2018

volume

24

1 reference

17 March 2018

issue

5

1 reference

17 March 2018

page(s)

613-620

1 reference

17 March 2018

Accurate prediction of solvent accessibility using neural networks-based regression.

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Predicting functionally important residues from sequence conservation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

A method to predict functional residues in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Distinguishing structural and functional restraints in evolution in order to identify interaction sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Analysis of symbolic sequences using the Jensen-Shannon divergence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Using a neural network and spatial clustering to predict the location of active sites in enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Analysis and prediction of functional sub-types from protein sequence alignments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

21 January 2018

The PROSITE database.

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Protein secondary structure prediction based on position-specific scoring matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Searching for functional sites in protein structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

firestar--prediction of functionally important residues using structural templates and alignment reliability

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Bayesian search of functionally divergent protein subgroups and their function specific residues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Comparison of site-specific rate-inference methods for protein sequences: empirical Bayesian methods are superior

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

A family of evolution-entropy hybrid methods for ranking protein residues by importance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

A primer on learning in Bayesian networks for computational biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

AL2CO: calculation of positional conservation in a protein sequence alignment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Prediction of catalytic residues using Support Vector Machine with selected protein sequence and structural properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Rate4Site: an algorithmic tool for the identification of functional regions in proteins by surface mapping of evolutionary determinants within their homologues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Scoring residue conservation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Incorporating background frequency improves entropy-based residue conservation measures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

Evaluation of features for catalytic residue prediction in novel folds

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM626

10.1093/BIOINFORMATICS/BTM626

21 January 2018

Identifiers

DOI

1 reference

17 March 2018

journals/bioinformatics/FischerMS08

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

17 March 2018