SKIP is a component of the spliceosome linking alternative splicing and the circadian clock in Arabidopsis. (Q53147955)

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12 February 2020

title

SKIP is a component of the spliceosome linking alternative splicing and the circadian clock in Arabidopsis (English)

1 reference

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12 February 2020

0 references

0 references

alternative mRNA splicing, via spliceosome

1 reference

11

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12 February 2020

Ondřej Gahura

7

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12 February 2020

František Půta

12

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12 February 2020

C R McClung

13

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12 February 2020

author name string

Xiaoxue Wang

1

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12 February 2020

Fangming Wu

2

1 reference

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12 February 2020

Qiguang Xie

3

1 reference

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12 February 2020

Huamei Wang

4

1 reference

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12 February 2020

Ying Wang

5

1 reference

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12 February 2020

Yanling Yue

6

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12 February 2020

Shuangshuang Ma

8

1 reference

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12 February 2020

Lei Liu

9

1 reference

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12 February 2020

Ying Cao

10

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12 February 2020

Xiaodong Xu

14

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12 February 2020

Ligeng Ma

15

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12 February 2020

publication date

31 August 2012

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12 February 2020

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12 February 2020

volume

24

1 reference

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12 February 2020

issue

8

1 reference

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12 February 2020

page(s)

3278-3295

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Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes

12 February 2020

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1 reference

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25 August 2018

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ELF3 recruitment to the PRR9 promoter requires other Evening Complex members in the Arabidopsis circadian clock

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The ELF4-ELF3-LUX complex links the circadian clock to diurnal control of hypocotyl growth

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REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock

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LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock

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The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation.

25 August 2018

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Type II protein arginine methyltransferase 5 (PRMT5) is required for circadian period determination in Arabidopsis thaliana

25 August 2018

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Clocks not winding down: unravelling circadian networks

25 August 2018

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A methyl transferase links the circadian clock to the regulation of alternative splicing

25 August 2018

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25 August 2018

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Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control

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25 August 2018

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PRR5 regulates phosphorylation, nuclear import and subnuclear localization of TOC1 in the Arabidopsis circadian clock

25 August 2018

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25 August 2018

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25 August 2018

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SKIP interacts with c-Myc and Menin to promote HIV-1 Tat transactivation

25 August 2018

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A putative novel transcription factor, AtSKIP, is involved in abscisic acid signalling and confers salt and osmotic tolerance in Arabidopsis

25 August 2018

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The exosome regulates circadian gene expression in a posttranscriptional negative feedback loop

25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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Prp45 affects Prp22 partition in spliceosomal complexes and splicing efficiency of non-consensus substrates.

25 August 2018

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Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes

25 August 2018

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25 August 2018

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25 August 2018

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XAP5 CIRCADIAN TIMEKEEPER coordinates light signals for proper timing of photomorphogenesis and the circadian clock in Arabidopsis.

25 August 2018

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25 August 2018

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25 August 2018

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PRR3 Is a vascular regulator of TOC1 stability in the Arabidopsis circadian clock

25 August 2018

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25 August 2018

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Targeted degradation of PSEUDO-RESPONSE REGULATOR5 by an SCFZTL complex regulates clock function and photomorphogenesis in Arabidopsis thaliana.

25 August 2018

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25 August 2018

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TIME FOR COFFEE encodes a nuclear regulator in the Arabidopsis thaliana circadian clock

25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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25 August 2018

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Temperature-modulated alternative splicing and promoter use in the Circadian clock gene frequency

25 August 2018

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PHYTOCLOCK 1 encoding a novel GARP protein essential for the Arabidopsis circadian clock

25 August 2018

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CHES1/FOXN3 interacts with Ski-interacting protein and acts as a transcriptional repressor

25 August 2018

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Distinct roles of GIGANTEA in promoting flowering and regulating circadian rhythms in Arabidopsis

25 August 2018

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LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms

25 August 2018

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25 August 2018

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Circadian rhythms from multiple oscillators: lessons from diverse organisms

25 August 2018

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A human splicing factor, SKIP, associates with P-TEFb and enhances transcription elongation by HIV-1 Tat.

25 August 2018

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Circadian gene expression in individual fibroblasts: cell-autonomous and self-sustained oscillators pass time to daughter cells

25 August 2018

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Posttranscriptional and posttranslational regulation of clock genes

25 August 2018

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The human Ski-interacting protein functionally substitutes for the yeast PRP45 gene

25 August 2018

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SPINDLY and GIGANTEA interact and act in Arabidopsis thaliana pathways involved in light responses, flowering, and rhythms in cotyledon movements.

25 August 2018

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CK2 phosphorylation of CCA1 is necessary for its circadian oscillator function in Arabidopsis

25 August 2018

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Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana

25 August 2018

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The TIME FOR COFFEE gene maintains the amplitude and timing of Arabidopsis circadian clocks.

25 August 2018

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Nuclear coactivator-62 kDa/Ski-interacting protein is a nuclear matrix-associated coactivator that may couple vitamin D receptor-mediated transcription and RNA splicing

25 August 2018

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Autoregulation of FCA pre-mRNA processing controls Arabidopsis flowering time

25 August 2018

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25 August 2018

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Identification and characterization of Prp45p and Prp46p, essential pre-mRNA splicing factors

25 August 2018

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Interactions of SKIP/NCoA-62, TFIIB, and retinoid X receptor with vitamin D receptor helix H10 residues

25 August 2018

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Alternative splicing of transcripts encoding Toll-like plant resistance proteins - what's the functional relevance to innate immunity?

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Functional significance of the alternative transcript processing of the Arabidopsis floral promoter FCA.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

BLAT—The BLAST-Like Alignment Tool

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

The genome sequence of Schizosaccharomyces pombe

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Functional interaction of phytochrome B and cryptochrome 2.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Positional cloning in Arabidopsis. Why it feels good to have a genome initiative working for you.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Pre-mRNA splicing in higher plants.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Alternatively spliced N resistance gene transcripts: their possible role in tobacco mosaic virus resistance

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Forty years of PRCs--what have we learned?

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Control of circadian rhythms and photoperiodic flowering by the Arabidopsis GIGANTEA gene

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Functional interactions of Prp8 with both splice sites at the spliceosomal catalytic center

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Phytochromes and cryptochromes in the entrainment of the Arabidopsis circadian clock.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Two alternatively spliced transcripts from the Drosophila period gene rescue rhythms having different molecular and behavioral characteristics

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Protein kinase CK2 interacts with and phosphorylates the Arabidopsis circadian clock-associated 1 protein.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

The Ski oncoprotein interacts with Skip, the human homolog of Drosophila Bx42

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Quantitative analysis of Drosophila period gene transcription in living animals

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

The Arabidopsis ELF3 gene regulates vegetative photomorphogenesis and the photoperiodic induction of flowering.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Structure and expression of a plant U1 snRNP 70K gene: alternative splicing of U1 snRNP 70K pre-mRNAs produces two different transcripts

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Circadian clock- and phytochrome-regulated transcription is conferred by a 78 bp cis-acting domain of the Arabidopsis CAB2 promoter

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

The regulation of circadian period by phototransduction pathways in Arabidopsis.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Temperature compensation of the circadian oscillation in drosophila pseudoobscura and its entrainment by temperature cycles

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Sequence logos: a new way to display consensus sequences

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Two puff-specific proteins bind within the 2.5 kb upstream region of the Drosophila melanogaster Sgs-4 gene.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Circadian Rhythms: Influences of Internal and External Factors on the Period Measured in Constant Conditions1

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3462631

Characterization of pseudo-response regulators in plants

25 August 2018

1 reference

12 December 2020

Overlapping and Distinct Roles of PRR7 and PRR9 in the Arabidopsis Circadian Clock

1 reference

12 December 2020

A genetic and physiological analysis of late flowering mutants in Arabidopsis thaliana

1 reference

12 December 2020

PSEUDO-RESPONSE REGULATOR 7 and 9 are partially redundant genes essential for the temperature responsiveness of the Arabidopsis circadian clock

1 reference

12 December 2020

Enhanced fitness conferred by naturally occurring variation in the circadian clock

1 reference

12 December 2020

The molecular basis of temperature compensation in the Arabidopsis circadian clock

1 reference

12 December 2020

Circadian Genetics in the Model Higher Plant, Arabidopsis thaliana

1 reference

12 December 2020

Functional implication of the MYB transcription factor RVE8/LCL5 in the circadian control of histone acetylation

1 reference

12 December 2020

Identifiers

DOI

10.1105/TPC.112.100081

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22942380%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

PMC publication ID

3462631

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22942380%20AND%20SRC:MED&resulttype=core&format=json