Molecular dynamics simulation approach for the prediction of transmembrane helix-helix heterodimers assembly (Q80657737)

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2 January 2020

title

Molecular dynamics simulation approach for the prediction of transmembrane helix-helix heterodimers assembly (English)

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2

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author name string

Oumarou Samna Soumana

series ordinal

1

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Monique Genest

series ordinal

3

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publication date

24 July 2007

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European Biophysics Journal

2 January 2020

published in

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17646979%20AND%20SRC:MED&resulttype=core&format=json

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volume

36

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issue

8

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page(s)

1071-1082

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https://scigraph.springernature.com/pub.10.1007/s00249-007-0195-6

2 January 2020

exact match

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cites work

Structure prediction of the dimeric neu/ErbB-2 transmembrane domain from multi-nanosecond molecular dynamics simulations

1 reference

12 December 2020

How proteins adapt to a membrane-water interface

1 reference

12 December 2020

Cell signaling by receptor tyrosine kinases

1 reference

12 December 2020

A sequence and structural study of transmembrane helices

1 reference

12 December 2020

Structure-based prediction of the stability of transmembrane helix-helix interactions: the sequence dependence of glycophorin A dimerization

1 reference

12 December 2020

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

12 December 2020

Improved prediction for the structure of the dimeric transmembrane domain of glycophorin A obtained through global searching

1 reference

12 December 2020

Implications of threonine hydrogen bonding in the glycophorin A transmembrane helix dimer

1 reference

12 December 2020

A simple method for modeling transmembrane helix oligomers

1 reference

12 December 2020

Study of the insulin dimerization: binding free energy calculations and per-residue free energy decomposition

1 reference

12 December 2020

The GxxxG motif: a framework for transmembrane helix-helix association

1 reference

12 December 2020

The progress of membrane protein structure determination

1 reference

12 December 2020

Essential role of a GXXXG motif for membrane channel formation by Helicobacter pylori vacuolating toxin

1 reference

12 December 2020

Modulation of glycophorin A transmembrane helix interactions by lipid bilayers: molecular dynamics calculations.

1 reference

12 December 2020

Helix packing in membrane proteins

1 reference

12 December 2020

Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs

1 reference

12 December 2020

Primary structure of human erythrocyte glycophorin A. Isolation and characterization of peptides and complete amino acid sequence

1 reference

12 December 2020

The Protein Data Bank

1 reference

12 December 2020

Helix to helix packing in proteins

1 reference

12 December 2020

A transmembrane helix dimer: structure and implications

1 reference

12 December 2020

Systematic molecular dynamics searching in a lipid bilayer: application to the glycophorin A and oncogenic ErbB-2 transmembrane domains.

1 reference

12 December 2020

Prediction of transmembrane helix orientation in polytopic membrane proteins

1 reference

12 December 2020

1 reference

12 December 2020

A dimerization hierarchy in the transmembrane domains of the HER receptor family

1 reference

12 December 2020

Molecular dynamics simulations of the ErbB-2 transmembrane domain within an explicit membrane environment: comparison with vacuum simulations

1 reference

12 December 2020

Backbone-backbone geometry of tertiary contacts between alpha-helices

1 reference

12 December 2020

Energetics, stability, and prediction of transmembrane helices

1 reference

12 December 2020

Membrane protein folding and stability: physical principles

1 reference

12 December 2020

Two motifs within a transmembrane domain, one for homodimerization and the other for heterodimerization

1 reference

12 December 2020

The single transmembrane domains of ErbB receptors self-associate in cell membranes

1 reference

12 December 2020

Transmembrane helix predictions revisited

1 reference

12 December 2020

The deaf and the dumb: the biology of ErbB-2 and ErbB-3

1 reference

12 December 2020

Structure determination of membrane proteins by NMR spectroscopy

1 reference

12 December 2020

Characterization of a new allele of the human ERBB2 gene by allele-specific competition hybridization

1 reference

12 December 2020

Mapping the energy surface of transmembrane helix-helix interactions

1 reference

12 December 2020

The basic biology of HER2.

1 reference

12 December 2020

Molecular modeling of c-erbB2 receptor dimerization: coiled-coil structure of wild and oncogenic transmembrane domains--stabilization by interhelical hydrogen bonds in the oncogenic form

1 reference

12 December 2020

Dimerization of the extracellular domain of the receptor for epidermal growth factor containing the membrane-spanning segment in response to treatment with epidermal growth factor

1 reference

12 December 2020

Membrane assembly of simple helix homo-oligomers studied via molecular dynamics simulations

1 reference

12 December 2020

Molecular Dynamics Simulations of Micelle Formation around Dimeric Glycophorin A Transmembrane Helices

1 reference

12 December 2020

A hierarchical network of interreceptor interactions determines signal transduction by Neu differentiation factor/neuregulin and epidermal growth factor

1 reference

12 December 2020

Computational searching and mutagenesis suggest a structure for the pentameric transmembrane domain of phospholamban

1 reference

12 December 2020

An automatic method for predicting transmembrane protein structures using cryo-EM and evolutionary data

1 reference

12 December 2020

The GxxxG motif of the transmembrane domain of subunit e is involved in the dimerization/oligomerization of the yeast ATP synthase complex in the mitochondrial membrane

1 reference

12 December 2020

How membranes shape protein structure.

1 reference

12 December 2020

Automated method for modeling seven-helix transmembrane receptors from experimental data

1 reference

12 December 2020

Isolation and characterization of ERBB3, a third member of the ERBB/epidermal growth factor receptor family: evidence for overexpression in a subset of human mammary tumors

1 reference

12 December 2020

Membrane protein folding and oligomerization: the two-stage model

1 reference

12 December 2020

Prediction of membrane protein structures by replica-exchange Monte Carlo simulations: case of two helices.

1 reference

12 December 2020

The glycophorin A transmembrane domain dimer: Sequence-specific propensity for a right-handed supercoil of helixes

1 reference

12 December 2020

A systematic search method for the identification of tightly packed transmembrane parallel alpha-helices

1 reference

12 December 2020

Transmembrane helix-helix interactions: comparative simulations of the glycophorin a dimer

1 reference

12 December 2020

ErbB-2, the preferred heterodimerization partner of all ErbB receptors, is a mediator of lateral signaling

1 reference

12 December 2020

Synthetic peptides as models for intrinsic membrane proteins

1 reference

12 December 2020

Progress in structure prediction of alpha-helical membrane proteins.

1 reference

12 December 2020

Motifs of serine and threonine can drive association of transmembrane helices

1 reference

12 December 2020

A putative molecular-activation switch in the transmembrane domain of erbB2.

1 reference

12 December 2020

Transmembrane protein structures without X-rays.

1 reference

12 December 2020

Molecular dynamics simulations of the E1/E2 transmembrane domain of the Semliki Forest virus

1 reference

12 December 2020

Modeling membrane proteins based on low-resolution electron microscopy maps: a template for the TM domains of the oxalate transporter OxlT.

1 reference

12 December 2020

Diversification of Neu differentiation factor and epidermal growth factor signaling by combinatorial receptor interactions

1 reference

12 December 2020

Internal packing of helical membrane proteins

1 reference

12 December 2020

Tyrosine kinase receptor with extensive homology to EGF receptor shares chromosomal location with neu oncogene

1 reference

12 December 2020

Helical packing patterns in membrane and soluble proteins.

1 reference

12 December 2020

10.1007/S00249-007-0195-6

Identifiers

DOI

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17646979%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

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