DNA double-strand-break complexity levels and their possible contributions to the probability for error-prone processing and repair pathway choice (Q27014837)

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English	DNA double-strand-break complexity levels and their possible contributions to the probability for error-prone processing and repair pathway choice	scientific article

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scholarly article

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14 July 2021

DNA double-strand-break complexity levels and their possible contributions to the probability for error-prone processing and repair pathway choice (English)

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14 July 2021

author name string

A. Schipler

1

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G. Iliakis

2

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language of work or name

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publication date

September 2013

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1 September 2013

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14 July 2021

Nucleic Acids Research

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14 July 2021

41

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16

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7589-605

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copyright license

Creative Commons Attribution 3.0 Unported

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Europe PubMed Central

14 July 2021

copyright status

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Higher-order chromatin structure-dependent repair of DNA double-strand breaks: modeling the elution of DNA from nucleoids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

Repair of x-ray-induced DNA double-strand breaks in specific Not I restriction fragments in human fibroblasts: joining of correct and incorrect ends

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

Initial events in the cellular effects of ionizing radiations: clustered damage in DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

Restriction-endonuclease-induced DNA double-strand breaks and chromosomal aberrations in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

Sites and structure of gamma radiation-induced DNA strand breaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

gamma Ray induced deoxyribonucleic acid strand breaks. 3' Glycolate termini

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

DNA damage produced by ionizing radiation in mammalian cells: identities, mechanisms of formation, and reparability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

Radiation and hydrogen peroxide induced free radical damage to DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

The yield of DNA double-strand breaks produced intracellularly by ionizing radiation: a review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

Sublethal damage, potentially lethal damage, and chromosomal aberrations in mammalian cells exposed to ionizing radiations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

Alkali-labile Sites and Post-irradiation Effects in Gamma-irradiated Biologically Active Double-stranded DNA in Aqueous Solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 September 2017

Keeping it together in times of stress: checkpoint function at stalled replication forks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

NHEJ and its backup pathways in chromosomal translocations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Translesion DNA synthesis-assisted non-homologous end-joining of complex double-strand breaks prevents loss of DNA sequences in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Histone H1 functions as a stimulatory factor in backup pathways of NHEJ

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Radiation-induced heat-labile sites that convert into DNA double-strand breaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Non-random distribution of DNA double-strand breaks induced by particle irradiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Clusters of DNA induced by ionizing radiation: formation of short DNA fragments. I. Theoretical modeling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Effects of postirradiation temperature on the yields of radiation-induced single- and double-strand breakage in SV40 DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

A component of DNA double-strand break repair is dependent on the spatial orientation of the lesions within the higher-order structures of chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Molecular and cell models of biological effects of heavy ion radiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Mammalian cells are not killed by DNA single-strand breaks caused by hydroxyl radicals from hydrogen peroxide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

A model relating cell survival to DNA fragment loss and unrepaired double-strand breaks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

UV mutagenesis, cytotoxicity and split-dose recovery in a human-CHO cell hybrid having intermediate (6-4) photoproduct repair.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Constraints on energy deposition and target size of multiply damaged sites associated with DNA double-strand breaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

31 May 2018

Modeling cell survival after photon irradiation based on double-strand break clustering in megabase pair chromatin loops

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Dynamics of DNA Supercoils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

I-SceI-based assays to examine distinct repair outcomes of mammalian chromosomal double strand breaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Constitutional chromothripsis rearrangements involve clustered double-stranded DNA breaks and nonhomologous repair mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Inhibition of B-NHEJ in plateau-phase cells is not a direct consequence of suppressed growth factor signaling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Calculation of the biological effects of ion beams based on the microscopic spatial damage distribution pattern

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Widespread dependence of backup NHEJ on growth state: ramifications for the use of DNA-PK inhibitors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Interplay of two major repair pathways in the processing of complex double-strand DNA breaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Heavy ion carcinogenesis and human space exploration.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Marked dependence on growth state of backup pathways of NHEJ.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

O6-methylguanine-DNA-methyltransferase (MGMT) gene therapy targeting haematopoietic stem cells: studies addressing safety issues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Analysis of DNA double-strand break repair by nonhomologous end joining in cell-free extracts from mammalian cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Simulation of DNA damage after proton irradiation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Higher-order chromatin structure-dependent repair of DNA double-strand breaks: factors affecting elution of DNA from nucleoids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Clusters of DNA damage induced by ionizing radiation: formation of short DNA fragments. II. Experimental detection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

DNA Strand Breakage Is Correlated with Unaltered Base Release after Gamma Irradiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3763544

28 November 2018

Track structure analysis of ultrasoft X-rays compared to high- and low-LET radiations

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The chromosome-breaking activity of the restriction endonuclease Alu I in CHO cells is independent of the S-phase of the cell cycle

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biochemistry of DNA lesions

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromatin loops are responsible for higher counts of small DNA fragments induced by high-LET radiation, while chromosomal domains do not affect the fragment sizes

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Induction and rejoining of gamma-ray-induced DNA single- and double-strand breaks in Chinese hamster AA8 cells and in two radiosensitive clones

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of biological effects of DNA damage induced by ionizing radiation and hydrogen peroxide in CHO cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Small scale genetic alterations contribute to increased mutability at the X-linked Hprt locus in vivo in Blm hypomorphic mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

No dose-dependence of DNA double-strand break misrejoining following alpha-particle irradiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative modelling of DNA damage using Monte Carlo track structure method

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stochastic simulation of DNA double-strand break repair by non-homologous end joining based on track structure calculations

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biophysical modeling of fragment length distributions of DNA plasmids after X and heavy-ion irradiation analyzed by atomic force microscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Induction by H2O2 of DNA and interphase chromosome damage in plateau-phase Chinese hamster ovary cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Monte Carlo simulation of the production of short DNA fragments by low-linear energy transfer radiation using higher-order DNA models

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Higher-order structure of interphase chromosomes and radiation-induced chromosomal exchange aberrations

1 reference

https://pubmed.ncbi.nlm.nih.gov/23804754

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKT556

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

release_cg2vl2whbzd7lpu2ym6qrvfmtm

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

0 references

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