Methylome evolution in plants (Q28078195)

10.1186/S13059-017-1176-4

DOI

12 July 2019

http://api.crossref.org/works?select=update-to&filter=doi:10.1186/S13059-017-1176-4

author

David Roquis

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Aurélien Tellier

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

author name string

Amaryllis Vidalis

1

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Daniel Živković

2

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

René Wardenaar

3

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Frank Johannes

6

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

language of work or name

1 reference

20 December 2016

6 references

30 June 2019

20 June 2019

14 September 2019

4 September 2020

30 October 2020

7 references

30 June 2019

20 June 2019

14 September 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

4 September 2020

30 October 2020

17

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

issue

1

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

page(s)

264

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

8 June 2020

copyright license

5 references

30 June 2019

20 June 2019

14 September 2019

4 September 2020

The pattern of polymorphism in Arabidopsis thaliana

30 October 2020

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic Control of Defense Signaling and Priming in Plants

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

The role of epigenetics in hybrid vigour

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genomic and epigenetic insights into the molecular bases of heterosis

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Disaggregating polyploidy, parental genome dosage and hybridity contributions to heterosis in Arabidopsis thaliana

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetics: Beyond Chromatin Modifications and Complex Genetic Regulation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic variation and environmental change

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epialleles in plant evolution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Evolution of plant genome architecture

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

EVOLUTION IN MENDELIAN POPULATIONS

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic variation in Arabidopsis disease resistance

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Maize chromomethylase Zea methyltransferase2 is required for CpNpG methylation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Hypermethylated SUPERMAN epigenetic alleles in arabidopsis

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

The Arabidopsis thaliana mobilome and its impact at the species level

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Widespread natural variation of DNA methylation within angiosperms

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

On the origin and evolutionary consequences of gene body DNA methylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Limited Contribution of DNA Methylation Variation to Expression Regulation in Arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

The role of DNA (de)methylation in immune responsiveness of Arabidopsis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genetic sources of population epigenomic variation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenome confrontation triggers immediate reprogramming of DNA methylation and transposon silencing in Arabidopsis thaliana F1 epihybrids

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Hormone-regulated defense and stress response networks contribute to heterosis in Arabidopsis F1 hybrids

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

An Epigenetic Role for Disrupted Paternal Gene Expression in Postzygotic Seed Abortion in Arabidopsis Interspecific Hybrids.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Loss of Karma transposon methylation underlies the mantled somaclonal variant of oil palm

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Loss of function mutations in the rice chromomethylase OsCMT3a cause a burst of transposition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

A Comparative Epigenomic Analysis of Polyploidy-Derived Genes in Soybean and Common Bean

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Priming for enhanced defense.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Rate, spectrum, and evolutionary dynamics of spontaneous epimutations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Transition Densities and Sample Frequency Spectra of Diffusion Processes with Selection and Variable Population Size

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Arabidopsis MSH1 mutation alters the epigenome and produces heritable changes in plant growth

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Crop Epigenomics: Identifying, Unlocking, and Harnessing Cryptic Variation in Crop Genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

A neutrality test for detecting selection on DNA methylation using single methylation polymorphism frequency spectrum

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Natural CMT2 variation is associated with genome-wide methylation changes and temperature seasonality

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

RNA-Directed DNA Methylation: The Evolution of a Complex Epigenetic Pathway in Flowering Plants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Evolution of DNA methylation patterns in the Brassicaceae is driven by differences in genome organization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Environmentally responsive genome-wide accumulation of de novo Arabidopsis thaliana mutations and epimutations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genomic distribution of H3K9me2 and DNA methylation in a maize genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic reprogramming in plant sexual reproduction.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Mutation of a major CG methylase in rice causes genome-wide hypomethylation, dysregulated genome expression, and seedling lethality.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

The contributions of transposable elements to the structure, function, and evolution of plant genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetics and plant genome evolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

The Amborella Genome and the Evolution of Flowering Plants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Extensive natural epigenetic variation at a de novo originated gene

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Dynamics and biological relevance of DNA demethylation in Arabidopsis antibacterial defense

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Gene body methylation is conserved between plant orthologs and is of evolutionary consequence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetics and crop improvement

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic variation: origin and transgenerational inheritance

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic remodeling of meiotic crossover frequency in Arabidopsis thaliana DNA methyltransferase mutants.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Dynamic differential methylation facilitates pathogen stress response in Arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genic and nongenic contributions to natural variation of quantitative traits in maize

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Deficiency in DNA methylation increases meiotic crossover rates in euchromatic but not in heterochromatic regions in Arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Loss of DNA methylation affects the recombination landscape in Arabidopsis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsis ecotypes and their reciprocal hybrids.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetics and the environment: emerging patterns and implications

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

A simple method for finding explicit analytic transition densities of diffusion processes with general diploid selection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Heritable epigenetic variation among maize inbreds

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Transgenerational epigenetic instability is a source of novel methylation variants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genome-wide evidence for local DNA methylation spreading from small RNA-targeted sequences in Arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic reprogramming in plant and animal development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Principles and challenges of genomewide DNA methylation analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Quantitative epigenetics: DNA sequence variation need not apply

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Assessing the impact of transgenerational epigenetic variation on complex traits

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Natural variation in DNA methylation in ribosomal RNA genes of Arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetics and plant evolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

A population-epigenetic model to infer site-specific methylation rates from double-stranded DNA methylation patterns

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Mechanisms of recent genome size variation in flowering plants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Transcription from an upstream promoter controls methylation signaling from an inverted repeat of endogenous genes in Arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Differential chromatin structure within a tandem array 100 kb upstream of the maize b1 locus is associated with paramutation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Gene genealogies in a metapopulation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Spontaneous mutational effects on reproductive traits of arabidopsis thaliana

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

An epigenetic mutation responsible for natural variation in floral symmetry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Suppression of crossing-over by DNA methylation in Ascobolus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Variegated phenotype and developmental methylation changes of a maize allele originating from epimutation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

The number of heterozygous nucleotide sites maintained in a finite population due to steady flux of mutations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Global DNA cytosine methylation as an evolving trait: phylogenetic signal and correlated evolution with genome size in angiosperms

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Purifying selection, drift, and reversible mutation with arbitrarily high mutation rates

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Patterns of population epigenomic diversity.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

The epigenetic machinery controlling transgenerational systemic acquired resistance

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Stress-induced DNA methylation changes and their heritability in asexual dandelions.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Epigenetic control of an endogenous gene family is revealed by a novel blue fluorescent mutant of Arabidopsis

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Molecular mechanisms in the developmental regulation of the maize Suppressor-mutator transposable element.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5175322

Evolutionary patterns of genic DNA methylation vary across land plants.

2 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Bursts of retrotransposition reproduced in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Selective epigenetic control of retrotransposition in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Heterosis and inbreeding depression of epigenetic Arabidopsis hybrids

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Epigenetic divergence is sufficient to trigger heterosis in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripening.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Whole-genome sequencing of multiple Arabidopsis thaliana populations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Spontaneous epigenetic variation in the Arabidopsis thaliana methylome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Genetic perturbation of the maize methylome

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Population scale mapping of novel transposable element diversity reveals links to gene regulation and epigenomic variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Reconstructing de novo silencing of an active plant retrotransposon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

DNA methylation dynamics during sexual reproduction in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Body-methylated genes in Arabidopsis thaliana are functionally important and evolve slowly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Epigenetic and genetic influences on DNA methylation variation in maize populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-016-1127-5

Natural occurring epialleles determine vitamin E accumulation in tomato fruits

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/27998290

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/27998290

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Interchromosomal Transfer of Epigenetic States in Ascobolus: Transfer of DNA Methylation Is Mechanistically Related to Homologous Recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/27998290

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S13059-016-1127-5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

8 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27998290%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

PubMed publication ID

2 references