Analysis of high accuracy, quantitative proteomics data in the MaxQB database (Q34149365)

31 July 2017

Analysis of high accuracy, quantitative proteomics data in the MaxQB database (English)

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31 July 2017

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Christoph Schaab

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author name string

Tamar Geiger

2

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31 July 2017

Gabriele Stoehr

3

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31 July 2017

Juergen Cox

4

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31 July 2017

Matthias Mann

5

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31 July 2017

2 February 2012

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Molecular & Cellular Proteomics

31 July 2017

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31 July 2017

11

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3

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31 July 2017

M111.014068

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describes a project that uses

31 July 2017

SQL

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26 June 2022

https://europepmc.org/article/PMC/PMC3316731

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins

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iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates

28 July 2018

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Published and perished? The influence of the searched protein database on the long-term storage of proteomics data

28 July 2018

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Global quantification of mammalian gene expression control

28 July 2018

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Quantitative, high-resolution proteomics for data-driven systems biology

28 July 2018

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MSblender: A probabilistic approach for integrating peptide identifications from multiple database search engines

28 July 2018

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Effective representation and storage of mass spectrometry-based proteomic data sets for the scientific community

28 July 2018

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Andromeda: a peptide search engine integrated into the MaxQuant environment

28 July 2018

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Analysis of phosphoproteomics data.

28 July 2018

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Ongoing and future developments at the Universal Protein Resource

28 July 2018

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28 July 2018

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Options and considerations when selecting a quantitative proteomics strategy

28 July 2018

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Proteomics: a pragmatic perspective

28 July 2018

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The Ontology Lookup Service: bigger and better

28 July 2018

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ProteomeCommons.org collaborative annotation and project management resource integrated with the Tranche repository

28 July 2018

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A guided tour of the Trans-Proteomic Pipeline

28 July 2018

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Perspectives of targeted mass spectrometry for protein biomarker verification

28 July 2018

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Universal sample preparation method for proteome analysis

28 July 2018

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NOPdb: Nucleolar Proteome Database--2008 update

28 July 2018

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MAPU 2.0: high-accuracy proteomes mapped to genomes

28 July 2018

1 reference

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Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

28 July 2018

1 reference

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28 July 2018

The PeptideAtlas project

1 reference

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PRIDE: the proteomics identifications database

28 July 2018

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A systematic approach to modeling, capturing, and disseminating proteomics experimental data

28 July 2018

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Bioinformatics analysis of mass spectrometry-based proteomics data sets

28 July 2018

1 reference

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Open source system for analyzing, validating, and storing protein identification data

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M111.014068

PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows

21 January 2018

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InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

21 January 2018

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A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed.

21 January 2018

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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.014068

Quantitative proteomics reveals subset-specific viral recognition in dendritic cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.014068

Improving SRM assay development: a global comparison between triple quadrupole, ion trap, and higher energy CID peptide fragmentation spectra.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.014068

A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M111.014068

The human proteome project: Current state and future direction.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3316731

28 October 2018

Identifiers

DOI

10.1074/MCP.M111.014068

1 reference

31 July 2017

1 reference

31 July 2017

1 reference