pcaGoPromoter--an R package for biological and regulatory interpretation of principal components in genome-wide gene expression data (Q34182655)

31 July 2017

title

pcaGoPromoter--an R package for biological and regulatory interpretation of principal components in genome-wide gene expression data (English)

1 reference

31 July 2017

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Jesper Thorvald Troelsen

Jesper Thorvald Troelsen

5

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Jørgen Olsen

Jørgen Olsen

6

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Jakob Benedict Seidelin

Jakob Benedict Seidelin

4

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Ole Haagen Nielsen

Ole Haagen Nielsen

3

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author name string

Morten Hansen

1

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31 July 2017

Thomas Alexander Gerds

2

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31 July 2017

language of work or name

English

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publication date

27 February 2012

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31 July 2017

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31 July 2017

volume

7

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31 July 2017

issue

2

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31 July 2017

page(s)

e32394

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Creative Commons Attribution 4.0 International

31 July 2017

copyright license

start time

27 February 2012

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

1 reference

affy package

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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Diagnosis of ulcerative colitis before onset of inflammation by multivariate modeling of genome-wide gene expression data

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

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28 July 2018

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28 July 2018

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An E2F site in the 5'-promoter region contributes to serum-dependent up-regulation of the human proliferating cell nuclear antigen gene

28 July 2018

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28 July 2018

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28 July 2018

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Hepatocyte nuclear factor 4alpha (nuclear receptor 2A1) is essential for maintenance of hepatic gene expression and lipid homeostasis

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Cluster analysis and display of genome-wide expression patterns

28 July 2018

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Identification of a novel inhibitor of mitogen-activated protein kinase kinase

28 July 2018

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28 July 2018

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Principal component analysis

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Enrichment or depletion of a GO category within a class of genes: which test?

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032394

Metabolome, transcriptome, and bioinformatic cis-element analyses point to HNF-4 as a central regulator of gene expression during enterocyte differentiation.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032394

ERK is an anti-inflammatory signal that suppresses expression of NF-kappaB-dependent inflammatory genes by inhibiting IKK activity in endothelial cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032394

Integrating transcription factor binding site information with gene expression datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032394

PCA2GO: a new multivariate statistics based method to identify highly expressed GO-Terms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0032394

Transcriptional gene expression profiles of colorectal adenoma, adenocarcinoma, and normal tissue examined by oligonucleotide arrays.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288097

Clinical phenotype and gene expression profile in Crohn's disease

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22384239

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Gene Expression Time Course in the Human Skin during Elicitation of Allergic Contact Dermatitis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22384239

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0032394

1 reference

31 July 2017

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1 reference

31 July 2017

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