Genome-wide identification of molecular pathways and biomarkers in response to arsenic exposure in zebrafish liver (Q34901720)

5 August 2017

Genome-wide identification of molecular pathways and biomarkers in response to arsenic exposure in zebrafish liver (English)

1 reference

5 August 2017

0 references

0 references

1 reference

Hongyan Xu

1

1 reference

5 August 2017

Siew Hong Lam

series ordinal

2

1 reference

5 August 2017

Yuan Shen

series ordinal

3

1 reference

5 August 2017

Zhiyuan Gong

series ordinal

4

1 reference

5 August 2017

language of work or name

English

0 references

publication date

29 July 2013

1 reference

5 August 2017

1 reference

5 August 2017

8

1 reference

5 August 2017

7

1 reference

5 August 2017

e68737

1 reference

Creative Commons Attribution 4.0 International

5 August 2017

start time

29 July 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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8 July 2018

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Manipulation of iron transporter genes results in the suppression of human and mouse mammary adenocarcinomas

8 July 2018

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Overexpression of the ATP binding cassette gene ABCA1 determines resistance to Curcumin in M14 melanoma cells

8 July 2018

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Id1 represses osteoclast-dependent transcription and affects bone formation and hematopoiesis

8 July 2018

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Ferritin binds and activates p53 under oxidative stress

8 July 2018

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Cholesteryl ester transfer protein I405V polymorphism influences apolipoprotein A-I response to a change in dietary fatty acid composition

8 July 2018

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

8 July 2018

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Characterization of housekeeping genes in zebrafish: male-female differences and effects of tissue type, developmental stage and chemical treatment

8 July 2018

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Health effects of arsenic and chromium in drinking water: recent human findings

8 July 2018

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Biomarkers of oxidative stress and damage in human populations exposed to arsenic.

8 July 2018

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Arsenic round the world: a review.

8 July 2018

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Ferritins: a family of molecules for iron storage, antioxidation and more.

8 July 2018

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The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies

8 July 2018

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Toxicogenomics of arsenic: classical ideas and recent advances

8 July 2018

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Zebrafish whole-adult-organism chemogenomics for large-scale predictive and discovery chemical biology

8 July 2018

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Liver is a target of arsenic carcinogenesis

8 July 2018

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

8 July 2018

1 reference

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Systemic iron homeostasis and the iron-responsive element/iron-regulatory protein (IRE/IRP) regulatory network

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Cytochrome p450 and chemical toxicology

8 July 2018

1 reference

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Arsenic-induced alteration in the expression of genes related to type 2 diabetes mellitus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Presenilin/gamma-secretase-dependent processing of beta-amyloid precursor protein regulates EGF receptor expression

8 July 2018

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qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data

8 July 2018

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Hepcidin and its role in regulating systemic iron metabolism

8 July 2018

1 reference

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Arsenic-induced bladder cancer in an animal model.

8 July 2018

1 reference

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Ferroportin-mediated mobilization of ferritin iron precedes ferritin degradation by the proteasome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

NF-kappaB and the immune response

8 July 2018

1 reference

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Introduction to NF-kappaB: players, pathways, perspectives

8 July 2018

1 reference

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Rat toxicogenomic study reveals analytical consistency across microarray platforms

8 July 2018

1 reference

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Toll-like receptors: from the discovery of NFkappaB to new insights into transcriptional regulations in innate immunity

8 July 2018

1 reference

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Metallothionein protects against oxidative stress-induced lysosomal destabilization

8 July 2018

1 reference

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The zebrafish gene map defines ancestral vertebrate chromosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Iron metabolism and toxicity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Role of compartmentalized redox-active iron in hydrogen peroxide-induced DNA damage and apoptosis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Haemochromatosis: find them or forget about them?

8 July 2018

1 reference

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An analytical system based on a compact flow cytometer for DNA fragment sizing and single-molecule detection

8 July 2018

1 reference

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Role of oxidative damage in the genotoxicity of arsenic

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

8 July 2018

Mitochondrial ferritin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Overview of the role of alcohol dehydrogenase and aldehyde dehydrogenase and their variants in the genesis of alcohol-related pathology

8 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

8 July 2018

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Disregulated glyceroneogenesis: PCK1 as a candidate diabetes and obesity gene

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Oxidative mechanism of arsenic toxicity and carcinogenesis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

In vivo activation of the p53 pathway by small-molecule antagonists of MDM2

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Endosomal and lysosomal effects of desferrioxamine: protection of HeLa cells from hydrogen peroxide-induced DNA damage and induction of cell-cycle arrest.

8 July 2018

1 reference

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Chemical discovery and global gene expression analysis in zebrafish

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Cholesteryl ester transfer protein: a novel target for raising HDL and inhibiting atherosclerosis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Upregulation of glutathione-related genes and enzyme activities in cultured human cells by sublethal concentrations of inorganic arsenic.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

8 July 2018

1 reference

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Apolipoprotein E: far more than a lipid transport protein

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Impaired recruitment of bone-marrow-derived endothelial and hematopoietic precursor cells blocks tumor angiogenesis and growth

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Redox environment of the cell as viewed through the redox state of the glutathione disulfide/glutathione couple

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Determination of interaction sites of phospholipase D1 for RhoA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Structure, function and regulation of the ABC1 gene product

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

A comparative map of the zebrafish genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Occurrence of monomethylarsonous acid in urine of humans exposed to inorganic arsenic

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

A novel duodenal iron-regulated transporter, IREG1, implicated in the basolateral transfer of iron to the circulation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

A novel mammalian iron-regulated protein involved in intracellular iron metabolism

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Positional cloning of zebrafish ferroportin1 identifies a conserved vertebrate iron exporter

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Differential effects of arsenic(III) and chromium(VI) on nuclear transcription factor binding

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Arsenic: health effects, mechanisms of actions, and research issues

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Regulation of gene expression by reactive oxygen

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Structure of an IkappaBalpha/NF-kappaB complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

p300/MDM2 complexes participate in MDM2-mediated p53 degradation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Iron in cytosolic ferritin can be recycled through lysosomal degradation in human fibroblasts

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Localized unfolding at the junction of three ferritin subunits. A mechanism for iron release?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Mdm2 promotes the rapid degradation of p53

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

The tumor promoter arsenite stimulates AP-1 activity by inhibiting a JNK phosphatase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Isolation, characterization, and chromosomal localization of mouse and human COUP-TF I and II genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Analysis of the mammalian gadd45 gene and its response to DNA damage

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Cloning and sequencing of the cDNA encoding a human testis phospholipid hydroperoxide glutathione peroxidase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Identification of a nuclear receptor that is activated by farnesol metabolites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Structure and organization of the human Ki-ras proto-oncogene and a related processed pseudogene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Chromosomal localization of three human ras genes by in situ molecular hybridization

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Structure, function, and evolution of ferritins.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Arsenic induced blood and brain oxidative stress and its response to some thiol chelators in rats.

8 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Arsenic round the world: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Behavioral and neurotoxic effects of arsenic exposure in zebrafish (Danio rerio, Teleostei: Cyprinidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Conserved synteny and the zebrafish genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Transcriptome analysis of Traf6 function in the innate immune response of zebrafish embryos

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Effects on levels of glutathione and some related enzymes in tissues after an acute arsenic exposure in rats and their relationship to dietary protein deficiency

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Fenton chemistry and iron chelation under physiologically relevant conditions: Electrochemistry and kinetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Molecular mechanisms regulating hepcidin revealed by hepcidin disorders.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Global alteration of gene expression in human keratinocytes by inorganic arsenic

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Molecular characterization and gene expression of the channel catfish ferritin H subunit after bacterial infection and iron treatment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Analysis of signal transduction pathways during anoxia exposure in a marine snail: A role for p38 MAP kinase and downstream signaling cascades

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Effects of arsenic, cadmium, chromium, and lead on gene expression regulated by a battery of 13 different promoters in recombinant HepG2 cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068737

Association of catalase genotype with oxidative stress in the predication of colorectal cancer: modification by epidemiological factors.

21 January 2018

1 reference

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Iron balance in the red blood cell donor.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

Some drinking-water disinfectants and contaminants, including arsenic. Monographs on chloramine, chloral and chloral hydrate, dichloroacetic acid, trichloroacetic acid and 3-chloro-4-(dichloromethyl)-5-hydroxy-2(5H)-furanone

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3726666

H-ferritin overexpression promotes radiation-induced leukemia/lymphoma in mice

26 October 2018

1 reference

12 December 2020

Decreased blood catalase activity is not related to specific beta-thalassemia mutations in Hungary

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12 December 2020

Vertebrate genome evolution and the zebrafish gene map

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12 December 2020

Low levels of arsenic trioxide stimulate proliferative signals in primary vascular cells without activating stress effector pathways

1 reference

12 December 2020

Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver

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12 December 2020

DMPS-arsenic challenge test. II. Modulation of arsenic species, including monomethylarsonous acid (MMA(III)), excreted in human urine

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Increased expression of GPI-specific phospholipase D in mouse models of type 1 diabetes

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Comparative aspects of alternative laboratory fish models

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10.1371/JOURNAL.PONE.0068737

Identifiers

DOI

1 reference

5 August 2017

0 references

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5 August 2017

1 reference