Host cell DNA repair pathways in adeno-associated viral genome processing (Q35139314)

6 August 2017

title

Host cell DNA repair pathways in adeno-associated viral genome processing (English)

1 reference

6 August 2017

Vivian W Choi

1

1 reference

6 August 2017

Douglas M McCarty

series ordinal

2

1 reference

6 August 2017

R Jude Samulski

series ordinal

3

1 reference

6 August 2017

language of work or name

English

0 references

publication date

1 November 2006

1 reference

6 August 2017

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6 August 2017

volume

80

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6 August 2017

issue

21

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6 August 2017

page(s)

10346-10356

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Competition between the DNA unwinding and strand pairing activities of the Werner and Bloom syndrome proteins

6 August 2017

cites work

1 reference

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13 July 2018

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Molecular characterization of adeno-associated viruses infecting children

13 July 2018

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The role of LMO2 in development and in T cell leukemia after chromosomal translocation or retroviral insertion

13 July 2018

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Analysis of the Xenopus Werner syndrome protein in DNA double-strand break repair

13 July 2018

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Large-scale analysis of adeno-associated virus vector integration sites in normal human cells

13 July 2018

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Harmonising the response to DSBs: a new string in the ATM bow.

13 July 2018

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AAV hybrid serotypes: improved vectors for gene delivery

13 July 2018

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The Artemis:DNA-PKcs endonuclease cleaves DNA loops, flaps, and gaps

13 July 2018

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Effects of adeno-associated virus DNA hairpin structure on recombination

13 July 2018

1 reference

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RecQ family members combine strand pairing and unwinding activities to catalyze strand exchange

13 July 2018

1 reference

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Functions of the adenovirus E4 proteins and their impact on viral vectors

13 July 2018

1 reference

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Viral transport of DNA damage that mimics a stalled replication fork

13 July 2018

1 reference

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Integration of adeno-associated virus (AAV) and recombinant AAV vectors

13 July 2018

1 reference

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Formation of deletions during double-strand break repair in Drosophila DmBlm mutants occurs after strand invasion.

13 July 2018

1 reference

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Adeno-associated virus vectors integrate at chromosome breakage sites

13 July 2018

1 reference

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Collaboration of homologous recombination and nonhomologous end-joining factors for the survival and integrity of mice and cells

13 July 2018

1 reference

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The role of homologous recombination repair in the formation of chromosome aberrations

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

DNA-dependent PK inhibits adeno-associated virus DNA integration

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

LMO2-associated clonal T cell proliferation in two patients after gene therapy for SCID-X1

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Pathways of DNA double-strand break repair during the mammalian cell cycle

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Consequences of DNA-dependent protein kinase catalytic subunit deficiency on recombinant adeno-associated virus genome circularization and heterodimerization in muscle tissue

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

RecQ helicases: caretakers of the genome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

13 July 2018

1 reference

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Genetic fate of recombinant adeno-associated virus vector genomes in muscle

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

An ATR- and Chk1-dependent S checkpoint inhibits replicon initiation following UVC-induced DNA damage

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Recombinational DNA repair and human disease

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Sensing and repairing DNA double-strand breaks

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

The Mre11 complex: at the crossroads of dna repair and checkpoint signalling

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

A murine model of Nijmegen breakage syndrome

13 July 2018

1 reference

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Involvement of cellular double-stranded DNA break binding proteins in processing of the recombinant adeno-associated virus genome.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

ATR is not required for p53 activation but synergizes with p53 in the replication checkpoint

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

DNA helicases, genomic instability, and human genetic disease

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Effect of DNA-dependent protein kinase on the molecular fate of the rAAV2 genome in skeletal muscle

13 July 2018

1 reference

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Chromosomal stability and the DNA double-stranded break connection

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

DNA double-strand breaks: signaling, repair and the cancer connection

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Loss of ATM function enhances recombinant adeno-associated virus transduction and integration through pathways similar to UV irradiation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Expression and nuclear localization of BLM, a chromosome stability protein mutated in Bloom's syndrome, suggest a role in recombination during meiotic prophase.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Formation of adeno-associated virus circular genomes is differentially regulated by adenovirus E4 ORF6 and E2a gene expression.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Circular intermediates of recombinant adeno-associated virus have defined structural characteristics responsible for long-term episomal persistence in muscle tissue

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Production of high-titer recombinant adeno-associated virus vectors in the absence of helper adenovirus

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Role of tyrosine phosphorylation of a cellular protein in adeno-associated virus 2-mediated transgene expression

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Cellular recombination pathways and viral terminal repeat hairpin structures are sufficient for adeno-associated virus integration in vivo and in vitro.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

New developments in the generation of Ad-free, high-titer rAAV gene therapy vectors

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Adeno-associated virus vector integration junctions.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

The XRCC2 DNA repair gene: identification of a positional candidate

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

A novel 165-base-pair terminal repeat sequence is the sole cis requirement for the adeno-associated virus life cycle

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

A stable cell line carrying adenovirus-inducible rep and cap genes allows for infectivity titration of adeno-associated virus vectors

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Pleiotropic defects in ataxia-telangiectasia protein-deficient mice

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Efficient long-term gene transfer into muscle tissue of immunocompetent mice by adeno-associated virus vector

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Targeted disruption of ATM leads to growth retardation, chromosomal fragmentation during meiosis, immune defects, and thymic lymphoma

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Atm-deficient mice: a paradigm of ataxia telangiectasia

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Menage à trois: double strand break repair, V(D)J recombination and DNA-PK.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Defective DNA-dependent protein kinase activity is linked to V(D)J recombination and DNA repair defects associated with the murine scid mutation.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

The cryptic life style of adeno-associated virus

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Correction of chromosomal instability and sensitivity to diverse mutagens by a cloned cDNA of the XRCC3 DNA repair gene

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

The genetic basis of cellular recovery from radiation damage: response of the radiosensitive irs lines to low-dose-rate irradiation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Molecular cloning of the human XRCC1 gene, which corrects defective DNA strand break repair and sister chromatid exchange

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Targeted integration of adeno-associated virus (AAV) into human chromosome 19

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Influence of double-strand-break repair pathways on radiosensitivity throughout the cell cycle in CHO cells.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Long-term pharmacologically regulated expression of erythropoietin in primates following AAV-mediated gene transfer.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Drosophila BLM in double-strand break repair by synthesis-dependent strand annealing

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Chromosomal effects of adeno-associated virus vector integration

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Structural analysis of adeno-associated virus transduction circular intermediates.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Recombinant adeno-associated virus purification using novel methods improves infectious titer and yield

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

Viral receptors and vector purification: new approaches for generating clinical-grade reagents

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1641795

ATR inhibition selectively sensitizes G1 checkpoint-deficient cells to lethal premature chromatin condensation

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17041215

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Virus-mediated killing of cells that lack p53 activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17041215

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

AAV loves an active genome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17041215

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/JVI.00841-06

1 reference

6 August 2017

1 reference

6 August 2017

1 reference