Whole-Community Metagenomics in Two Different Anammox Configurations: Process Performance and Community Structure (Q36312011)

http://europepmc.org/abstract/PMC/6540106

1 July 2019

title

Whole-Community Metagenomics in Two Different Anammox Configurations: Process Performance and Community Structure (English)

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http://europepmc.org/abstract/PMC/6540106

1 July 2019

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8

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1 June 2020

Vikram Kapoor

5

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1 June 2020

Ramesh Goel

9

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1 June 2020

author name string

Ananda S Bhattacharjee

1

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1 June 2020

Sha Wu

2

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1 June 2020

Christopher E Lawson

3

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1 June 2020

Mike S M Jetten

4

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1 June 2020

Jorge W Santo Domingo

6

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1 June 2020

Katherine D McMahon

7

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1 June 2020

language of work or name

English

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publication date

31 March 2017

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http://europepmc.org/abstract/PMC/6540106

1 July 2019

published in

Environmental Science & Technology

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28306234%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

volume

51

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1 June 2020

issue

8

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1 June 2020

page(s)

4317-4327

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Missing lithotroph identified as new planctomycete

1 June 2020

cites work

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12 December 2020

The SHARON-Anammox process for treatment of ammonium rich wastewater.

1 reference

12 December 2020

The CANON system (Completely Autotrophic Nitrogen-removal Over Nitrite) under ammonium limitation: interaction and competition between three groups of bacteria

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12 December 2020

New concepts of microbial treatment processes for the nitrogen removal in wastewater.

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ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences

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12 December 2020

Community structure and metabolism through reconstruction of microbial genomes from the environment

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12 December 2020

Environmental genome shotgun sequencing of the Sargasso Sea

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12 December 2020

Stable carbon isotopic fractionations associated with inorganic carbon fixation by anaerobic ammonium-oxidizing bacteria

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12 December 2020

Genomic insights that advance the species definition for prokaryotes

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12 December 2020

Coupling the SHARON process with anammox: model-based scenario analysis with focus on operating costs.

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12 December 2020

Deciphering the evolution and metabolism of an anammox bacterium from a community genome

1 reference

12 December 2020

The membrane bioreactor: a novel tool to grow anammox bacteria as free cells.

1 reference

12 December 2020

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

1 reference

12 December 2020

Simultaneous partial nitrification, anaerobic ammonium oxidation and denitrification (SNAD) in a full-scale landfill-leachate treatment plant.

1 reference

12 December 2020

Microbial and physicochemical characteristics of compact anaerobic ammonium-oxidizing granules in an upflow anaerobic sludge blanket reactor

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12 December 2020

QIIME allows analysis of high-throughput community sequencing data

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12 December 2020

Engineering. Sewage treatment with anammox

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12 December 2020

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

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12 December 2020

Impact of inocula and growth mode on the molecular microbial ecology of anaerobic ammonia oxidation (anammox) bioreactor communities

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12 December 2020

Search and clustering orders of magnitude faster than BLAST

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12 December 2020

Metagenomic analyses: past and future trends

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12 December 2020

Microbial nitrogen cycling processes in oxygen minimum zones.

1 reference

12 December 2020

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

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12 December 2020

UCHIME improves sensitivity and speed of chimera detection

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12 December 2020

WebMGA: a customizable web server for fast metagenomic sequence analysis

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12 December 2020

FLASH: fast length adjustment of short reads to improve genome assemblies

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12 December 2020

Molecular mechanism of anaerobic ammonium oxidation.

1 reference

12 December 2020

The metagenomic basis of anammox metabolism in Candidatus 'Brocadia fulgida'.

1 reference

12 December 2020

Hydrazine synthase, a unique phylomarker with which to study the presence and biodiversity of anammox bacteria

1 reference

12 December 2020

Nitrite oxidation in the Namibian oxygen minimum zone

1 reference

12 December 2020

The metagenome of the marine anammox bacterium 'Candidatus Scalindua profunda' illustrates the versatility of this globally important nitrogen cycle bacterium

1 reference

12 December 2020

Metagenomics - a guide from sampling to data analysis

1 reference

12 December 2020

Anammox organism KSU-1 expresses a NirK-type copper-containing nitrite reductase instead of a NirS-type with cytochrome cd1.

1 reference

12 December 2020

MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads

1 reference

12 December 2020

Anaerobic ammonia oxidation (ANAMMOX) for side-stream treatment of anaerobic digester filtrate process performance and microbiology.

1 reference

12 December 2020

Ecophysiological role and function of uncultured Chloroflexi in an anammox reactor.

1 reference

12 December 2020

Metagenome Analysis of a Complex Community Reveals the Metabolic Blueprint of Anammox Bacterium "Candidatus Jettenia asiatica".

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12 December 2020

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

1 reference

12 December 2020

How to make a living from anaerobic ammonium oxidation.

1 reference

12 December 2020

MetaPathways: a modular pipeline for constructing pathway/genome databases from environmental sequence information

1 reference

12 December 2020

PhyloSift: phylogenetic analysis of genomes and metagenomes

1 reference

12 December 2020

Coexistence of nitrifying, anammox and denitrifying bacteria in a sequencing batch reactor

1 reference

12 December 2020

Simple, rapid and effective preservation and reactivation of anaerobic ammonium oxidizing bacterium "Candidatus Brocadia sinica".

1 reference

12 December 2020

Evaluating synteny for improved comparative studies

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12 December 2020

Omega: an overlap-graph de novo assembler for metagenomics.

1 reference

12 December 2020

MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm

1 reference

12 December 2020

Microbial community composition and ultrastructure of granules from a full-scale anammox reactor.

1 reference

12 December 2020

MeDuSa: a multi-draft based scaffolder.

1 reference

12 December 2020

Draft Genome Sequence of an Anaerobic Ammonium-Oxidizing Bacterium, "Candidatus Brocadia sinica".

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12 December 2020

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

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12 December 2020

Microbial species delineation using whole genome sequences

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12 December 2020

Impact of Heavy Metals on Transcriptional and Physiological Activity of Nitrifying Bacteria

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12 December 2020

Metagenomic analysis of anammox communities in three different microbial aggregates.

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12 December 2020

Genome-based microbial ecology of anammox granules in a full-scale wastewater treatment system

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12 December 2020

Hydroxylamine-dependent anaerobic ammonium oxidation (anammox) by "Candidatus Brocadia sinica".

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12 December 2020

Ammonium removal by the oxygen-limited autotrophic nitrification-denitrification system

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12 December 2020

The anaerobic oxidation of ammonium

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12 December 2020

Identifiers

DOI

10.1021/ACS.EST.6B05855

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28306234%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28306234%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

PubMed publication ID

28306234

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