Germline-encoded neutralization of a Staphylococcus aureus virulence factor by the human antibody repertoire (Q37430689)

20 August 2017

Germline-encoded neutralization of a Staphylococcus aureus virulence factor by the human antibody repertoire (English)

1 reference

20 August 2017

Staphylococcus aureus

1 reference

Marina Sirota

10

0 references

author name string

Yik Andy Yeung

1

1 reference

20 August 2017

Davide Foletti

2

1 reference

20 August 2017

Xiaodi Deng

3

1 reference

20 August 2017

Yasmina Abdiche

4

1 reference

20 August 2017

Pavel Strop

5

1 reference

20 August 2017

Jacob Glanville

6

1 reference

20 August 2017

Steven Pitts

7

1 reference

20 August 2017

Kevin Lindquist

8

1 reference

20 August 2017

Purnima D Sundar

9

1 reference

20 August 2017

Adela Hasa-Moreno

11

1 reference

20 August 2017

Amber Pham

12

1 reference

20 August 2017

Jody Melton Witt

13

1 reference

20 August 2017

Irene Ni

14

1 reference

20 August 2017

Jaume Pons

15

1 reference

20 August 2017

David Shelton

16

1 reference

20 August 2017

Arvind Rajpal

17

1 reference

20 August 2017

Javier Chaparro-Riggers

18

1 reference

20 August 2017

language of work or name

English

0 references

publication date

18 November 2016

1 reference

20 August 2017

Nature Communications

1 reference

20 August 2017

7

1 reference

20 August 2017

13376

1 reference

Creative Commons Attribution 4.0 International

20 August 2017

start time

18 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

cites work

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H5N1 Vaccine-Elicited Memory B Cells Are Genetically Constrained by the IGHV Locus in the Recognition of a Neutralizing Epitope in the Hemagglutinin Stem.

23 August 2017

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Staphylococcus aureus infections: epidemiology, pathophysiology, clinical manifestations, and management.

23 August 2017

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A Diagnostic Serum Antibody Test for Patients With Staphylococcus aureus Osteomyelitis

23 August 2017

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Virus-induced preferential antibody gene-usage and its importance in humoral autoimmunity.

23 August 2017

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Staphylococcus aureus infection induces protein A-mediated immune evasion in humans.

23 August 2017

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Molecular and evolutionary analysis of NEAr-iron Transporter (NEAT) domains

23 August 2017

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Solution Structure and Molecular Determinants of Hemoglobin Binding of the First NEAT Domain of IsdB in Staphylococcus aureus

23 August 2017

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Molecular signatures of hemagglutinin stem-directed heterosubtypic human neutralizing antibodies against influenza A viruses

23 August 2017

1 reference

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High-throughput epitope binning assays on label-free array-based biosensors can yield exquisite epitope discrimination that facilitates the selection of monoclonal antibodies with functional activity

23 August 2017

1 reference

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Structure of the Hemoglobin-IsdH Complex Reveals the Molecular Basis of Iron Capture byStaphylococcus aureus

23 August 2017

1 reference

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Methicillin-resistant Staphylococcus aureus therapy: past, present, and future

23 August 2017

1 reference

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IsdB-dependent hemoglobin binding is required for acquisition of heme by Staphylococcus aureus

23 August 2017

1 reference

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PATRIC, the bacterial bioinformatics database and analysis resource

23 August 2017

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Role of protein A in the evasion of host adaptive immune responses by Staphylococcus aureus

23 August 2017

1 reference

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Iron in infection and immunity

23 August 2017

1 reference

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A recurring motif for antibody recognition of the receptor-binding site of influenza hemagglutinin

23 August 2017

1 reference

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An integrated map of genetic variation from 1,092 human genomes

23 August 2017

1 reference

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Structural and genetic basis for development of broadly neutralizing influenza antibodies

23 August 2017

1 reference

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Highly Conserved Protective Epitopes on Influenza B Viruses

23 August 2017

1 reference

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Structural basis for germ-line gene usage of a potent class of antibodies targeting the CD4-binding site of HIV-1 gp120.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Exploring the dynamic range of the kinetic exclusion assay in characterizing antigen-antibody interactions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Naive antibody gene-segment frequencies are heritable and unaltered by chronic lymphocyte ablation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

High-resolution description of antibody heavy-chain repertoires in humans

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Unique Heme-Iron Coordination by the Hemoglobin Receptor IsdB of Staphylococcus aureus

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Overview of the CCP4 suite and current developments

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Rare antibodies from combinatorial libraries suggests an S.O.S. component of the human immunological repertoire

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

A fully human monoclonal antibody to Staphylococcus aureus iron regulated surface determinant B (IsdB) with functional activity in vitro and in vivo

23 August 2017

1 reference

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Expanding the ProteOn XPR36 biosensor into a 36-ligand array expedites protein interaction analysis

23 August 2017

1 reference

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Specificity for human hemoglobin enhances Staphylococcus aureus infection

23 August 2017

1 reference

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Features and development of Coot

23 August 2017

1 reference

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PHENIX: a comprehensive Python-based system for macromolecular structure solution

23 August 2017

1 reference

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Precise determination of the diversity of a combinatorial antibody library gives insight into the human immunoglobulin repertoire

23 August 2017

1 reference

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Structural biology of heme binding in the Staphylococcus aureus Isd system

23 August 2017

1 reference

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23 August 2017

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Antibody recognition of a highly conserved influenza virus epitope

23 August 2017

1 reference

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Structural and functional bases for broad-spectrum neutralization of avian and human influenza A viruses

23 August 2017

1 reference

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Jalview Version 2--a multiple sequence alignment editor and analysis workbench

23 August 2017

1 reference

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VH1-69 germline encoded antibodies directed towards ADAMTS13 in patients with acquired thrombotic thrombocytopenic purpura

23 August 2017

1 reference

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Co-evolutionary aspects of human colonisation and infection by Staphylococcus aureus

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Preparation of ultrapure bovine and human hemoglobin by anion exchange chromatography

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Staphylococcus aureus IsdB is a hemoglobin receptor required for heme iron utilization.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Concerted and birth-and-death evolution of multigene families

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Comparison of antibody repertoires against Staphylococcus aureus in healthy individuals and in acutely infected patients

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

MUSCLE: multiple sequence alignment with high accuracy and high throughput

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Evidence for involvement of a hydrophobic patch in framework region 1 of human V4-34-encoded Igs in recognition of the red blood cell I antigen

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

NEAT: a domain duplicated in genes near the components of a putative Fe3+ siderophore transporter from Gram-positive pathogenic bacteria

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

An iron-regulated sortase anchors a class of surface protein during Staphylococcus aureus pathogenesis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Phage display for selection of novel binding peptides

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Crystal structure of a Staphylococcus aureus protein A domain complexed with the Fab fragment of a human IgM antibody: structural basis for recognition of B-cell receptors and superantigen activity

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Structural requirements of the major protective antibody to Haemophilus influenzae type b

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Standard conformations for the canonical structures of immunoglobulins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Variable region diversity in human circulating antibodies specific for the capsular polysaccharide of Haemophilus influenzae type b. Preferential usage of two types of VH3 heavy chains

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Nucleotide sequence analysis of the V regions of two IgM cold agglutinins. Evidence that the VH4-21 gene segment is responsible for the major cross-reactive idiotype

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Viral receptor-binding site antibodies with diverse germline origins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Affinity dependence of the B cell response to antigen: a threshold, a ceiling, and the importance of off-rate

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Rapid development of broadly influenza neutralizing antibodies through redundant mutations

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Variable region gene analysis of pathologic human autoantibodies to the related i and I red blood cell antigens

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

PCR cloning of human immunoglobulin genes

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Passage of heme-iron across the envelope of Staphylococcus aureus.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

V(H)1-69 gene is preferentially used by hepatitis C virus-associated B cell lymphomas and by normal B cells responding to the E2 viral antigen

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Diversity in the CDR3 region of V(H) is sufficient for most antibody specificities

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5120205

Processing of X-ray diffraction data collected in oscillation mode

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS13376

Clonal characterization of the human IgG antibody repertoire to Haemophilus influenzae type b polysaccharide. III. A single VKII gene and one of several JK genes are joined by an invariant arginine to form the most common L chain V region

21 January 2018

1 reference

12 December 2020

The I Binding Specificity of Human VH4-34 (VH4-21) Encoded Antibodies is Determined by Both VHFramework Region 1 and Complementarity Determining Region 3

1 reference

12 December 2020

Exploring "one-shot" kinetics and small molecule analysis using the ProteOn XPR36 array biosensor

1 reference

12 December 2020

Restricted immunoglobulin VH usage and VDJ combinations in the human response to Haemophilus influenzae type b capsular polysaccharide. Nucleotide sequences of monospecific anti-Haemophilus antibodies and polyspecific antibodies cross-reacting with

1 reference

12 December 2020

Identifiers

DOI

10.1038/NCOMMS13376

1 reference

Dimensions Publication ID

20 August 2017

0 references

0 references

1 reference

20 August 2017

PubMed publication ID

27857134

1 reference