Cap and cap-binding proteins in the control of gene expression (Q37940415)

25 August 2017

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title

Cap and cap-binding proteins in the control of gene expression (English)

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25 August 2017

3

Nahum Sonenberg

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25 August 2017

Ivan Topisirovic

1

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author name string

Yuri V Svitkin

series ordinal

2

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PubMed ID

21957010

25 August 2017

Aaron J Shatkin

series ordinal

4

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25 August 2017

28 October 2010

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Wiley interdisciplinary reviews. RNA

25 August 2017

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25 August 2017

2

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25 August 2017

2

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25 August 2017

277-298

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Viral and cellular mRNA capping: past and prospects

25 August 2017

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Regulation of translation initiation in eukaryotes: mechanisms and biological targets

21 January 2018

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What messenger RNA capping tells us about eukaryotic evolution.

21 January 2018

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Processing the message: structural insights into capping and decapping mRNA.

21 January 2018

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The role of the cap structure in RNA processing and nuclear export

21 January 2018

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Capping of eucaryotic mRNAs

21 January 2018

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The ends of the affair: capping and polyadenylation.

21 January 2018

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Yeast mRNA cap methyltransferase is a 50-kilodalton protein encoded by an essential gene

21 January 2018

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Isolation and characterization of the yeast mRNA capping enzyme beta subunit gene encoding RNA 5'-triphosphatase, which is essential for cell viability

21 January 2018

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Cloning and characterization of three human cDNAs encoding mRNA (guanine-7-)-methyltransferase, an mRNA cap methylase

21 January 2018

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Isolation and characterization of a human cDNA for mRNA 5'-capping enzyme

21 January 2018

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Mammalian capping enzyme complements mutant Saccharomyces cerevisiae lacking mRNA guanylyltransferase and selectively binds the elongating form of RNA polymerase II

21 January 2018

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The guanylyltransferase domain of mammalian mRNA capping enzyme binds to the phosphorylated carboxyl-terminal domain of RNA polymerase II

21 January 2018

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5'-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II

21 January 2018

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Distinct roles for CTD Ser-2 and Ser-5 phosphorylation in the recruitment and allosteric activation of mammalian mRNA capping enzyme

21 January 2018

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Phosphorylation and functions of the RNA polymerase II CTD

21 January 2018

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Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription

21 January 2018

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Dynamic association of capping enzymes with transcribing RNA polymerase II

21 January 2018

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Association of Cdk-activating kinase subunits with transcription factor TFIIH

21 January 2018

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Transcription elongation factor hSPT5 stimulates mRNA capping

21 January 2018

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Cocrystal structure of the messenger RNA 5' cap-binding protein (eIF4E) bound to 7-methyl-GDP

21 January 2018

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Structure of translation factor eIF4E bound to m7GDP and interaction with 4E-binding protein

21 January 2018

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Crystal structure of the human nuclear cap binding complex

21 January 2018

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Large-scale induced fit recognition of an m(7)GpppG cap analogue by the human nuclear cap-binding complex

21 January 2018

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Structural basis of m7GpppG binding to the nuclear cap-binding protein complex

21 January 2018

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Structural Features of Human Initiation Factor 4E, Studied by X-ray Crystal Analyses and Molecular Dynamics Simulations

21 January 2018

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Biophysical studies of eIF4E cap-binding protein: recognition of mRNA 5' cap structure and synthetic fragments of eIF4G and 4E-BP1 proteins

21 January 2018

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A cap binding protein that may mediate nuclear export of RNA polymerase II-transcribed RNAs

21 January 2018

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Recognition of mRNA cap structures by viral and cellular proteins

21 January 2018

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Specific protein recognition of an mRNA cap through its alkylated base

21 January 2018

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mRNA cap recognition: dominant role of enhanced stacking interactions between methylated bases and protein aromatic side chains

21 January 2018

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The "cap-binding slot" of an mRNA cap-binding protein: quantitative effects of aromatic side chain choice in the double-stacking sandwich with cap

21 January 2018

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Insertion of an N7-methylguanine mRNA cap between two coplanar aromatic residues of a cap-binding protein is fast and selective for a positively charged cap.

21 January 2018

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Structural basis of mRNA cap recognition by proteins

21 January 2018

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The polynucleotide ligase and RNA capping enzyme superfamily of covalent nucleotidyltransferases.

21 January 2018

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The nuclear cap-binding complex is a novel target of growth factor receptor-coupled signal transduction

21 January 2018

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Recognition of capped RNA substrates by VP39, the vaccinia virus-encoded mRNA cap-specific 2'-O-methyltransferase

21 January 2018

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Fluorescence study of the binding of m7GpppG and rabbit globin mRNA to protein synthesis initiation factors 4A, 4E, and 4F.

21 January 2018

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Interaction of wheat germ protein synthesis initiation factor eIF-(iso)4F and its subunits p28 and p86 with m7GTP and mRNA analogues

21 January 2018

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Stopped-flow kinetic analysis of eIF4E and phosphorylated eIF4E binding to cap analogs and capped oligoribonucleotides: evidence for a one-step binding mechanism

21 January 2018

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The exon junction complex is detected on CBP80-bound but not eIF4E-bound mRNA in mammalian cells: dynamics of mRNP remodeling

21 January 2018

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REF, an evolutionary conserved family of hnRNP-like proteins, interacts with TAP/Mex67p and participates in mRNA nuclear export.

21 January 2018

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The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans

21 January 2018

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Human mRNA export machinery recruited to the 5' end of mRNA

21 January 2018

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Cotranscriptional mRNP assembly: from the DNA to the nuclear pore

21 January 2018

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From birth to death: the complex lives of eukaryotic mRNAs

21 January 2018

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Participation of the nuclear cap binding complex in pre-mRNA 3' processing

21 January 2018

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Nonsense-mediated mRNA decay in mammals

21 January 2018

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Cap-dependent RNA splicing in a HeLa nuclear extract

21 January 2018

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Recognition of cap structure in splicing in vitro of mRNA precursors.

21 January 2018

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A nuclear cap-binding complex facilitates association of U1 snRNP with the cap-proximal 5' splice site.

21 January 2018

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A cap-binding protein complex mediating U snRNA export

21 January 2018

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A nuclear cap binding protein complex involved in pre-mRNA splicing

21 January 2018

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Exon recognition in vertebrate splicing

21 January 2018

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TREX is a conserved complex coupling transcription with messenger RNA export

21 January 2018

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Recruitment of the human TREX complex to mRNA during splicing

21 January 2018

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TREX, SR proteins and export of mRNA.

21 January 2018

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A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae

21 January 2018

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Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster

21 January 2018

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RNA length defines RNA export pathway

21 January 2018

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Packing and delivery of a genetic message.

21 January 2018

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SRprises along a messenger's journey

21 January 2018

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Protein ligands to HuR modulate its interaction with target mRNAs in vivo

21 January 2018

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Delineation of mRNA export pathways by the use of cell-permeable peptides

21 January 2018

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Molecular dissection of the eukaryotic initiation factor 4E (eIF4E) export-competent RNP

21 January 2018

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Monomethylated cap structures facilitate RNA export from the nucleus.

21 January 2018

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Why do cells need an assembly machine for RNA-protein complexes?

21 January 2018

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Snurportin1, an m3G-cap-specific nuclear import receptor with a novel domain structure

21 January 2018

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PHAX, a mediator of U snRNA nuclear export whose activity is regulated by phosphorylation

21 January 2018

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Importin provides a link between nuclear protein import and U snRNA export.

21 January 2018

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Alternative splicing resulting in nonsense-mediated mRNA decay: what is the meaning of nonsense?

21 January 2018

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The EJC factor eIF4AIII modulates synaptic strength and neuronal protein expression

21 January 2018

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21 January 2018

The meaning of nonsense

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A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance

21 January 2018

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5' exon interactions within the human spliceosome establish a framework for exon junction complex structure and assembly

21 January 2018

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eIF4AIII binds spliced mRNA in the exon junction complex and is essential for nonsense-mediated decay

21 January 2018

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RNA helicases--one fold for many functions

21 January 2018

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The exon junction core complex is locked onto RNA by inhibition of eIF4AIII ATPase activity

21 January 2018

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Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay

21 January 2018

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Upf1 phosphorylation triggers translational repression during nonsense-mediated mRNA decay

21 January 2018

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SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells

21 January 2018

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SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan

21 January 2018

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Mammalian Staufen1 recruits Upf1 to specific mRNA 3'UTRs so as to elicit mRNA decay

21 January 2018

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The mechanism of eukaryotic translation initiation and principles of its regulation

21 January 2018

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Mammalian poly(A)-binding protein is a eukaryotic translation initiation factor, which acts via multiple mechanisms

21 January 2018

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General RNA-binding proteins have a function in poly(A)-binding protein-dependent translation

21 January 2018

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Purification and characterization of a new eukaryotic protein translation factor. Eukaryotic initiation factor 4H

21 January 2018

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Modulation of the helicase activity of eIF4A by eIF4B, eIF4H, and eIF4F.

21 January 2018

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Bidirectional RNA helicase activity of eucaryotic translation initiation factors 4A and 4F

21 January 2018

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Crystal structure of the yeast eIF4A-eIF4G complex: an RNA-helicase controlled by protein-protein interactions

21 January 2018

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Topology and regulation of the human eIF4A/4G/4H helicase complex in translation initiation

21 January 2018

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rRNA suppressor of a eukaryotic translation initiation factor 5B/initiation factor 2 mutant reveals a binding site for translational GTPases on the small ribosomal subunit.

21 January 2018

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Coupled release of eukaryotic translation initiation factors 5B and 1A from 80S ribosomes following subunit joining.

21 January 2018

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eIF5 has GDI activity necessary for translational control by eIF2 phosphorylation

21 January 2018

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Release of initiation factors from 48S complexes during ribosomal subunit joining and the link between establishment of codon-anticodon base-pairing and hydrolysis of eIF2-bound GTP.

21 January 2018

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The joining of ribosomal subunits in eukaryotes requires eIF5B.

21 January 2018

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Position of eukaryotic initiation factor eIF1 on the 40S ribosomal subunit determined by directed hydroxyl radical probing

21 January 2018

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Communication between eukaryotic translation initiation factors 5 and 1A within the ribosomal pre-initiation complex plays a role in start site selection

21 January 2018

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A conformational change in the eukaryotic translation preinitiation complex and release of eIF1 signal recognition of the start codon

21 January 2018

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eIF-4E expression and its role in malignancies and metastases.

21 January 2018

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The mRNA 5' cap-binding protein eIF4E and control of cell growth

21 January 2018

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Targeting the eukaryotic translation initiation factor 4E for cancer therapy

21 January 2018

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Translational control in cancer.

21 January 2018

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The requirement for eukaryotic initiation factor 4A (elF4A) in translation is in direct proportion to the degree of mRNA 5' secondary structure.

21 January 2018

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Malignant transformation by a eukaryotic initiation factor subunit that binds to mRNA 5' cap

21 January 2018

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The translation factor eIF-4E promotes tumor formation and cooperates with c-Myc in lymphomagenesis

21 January 2018

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PML RING suppresses oncogenic transformation by reducing the affinity of eIF4E for mRNA.

21 January 2018

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Dissecting eIF4E action in tumorigenesis

21 January 2018

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eIF4E--from translation to transformation

21 January 2018

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eIF4E expression in tumors: its possible role in progression of malignancies

21 January 2018

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Insulin-dependent stimulation of protein synthesis by phosphorylation of a regulator of 5'-cap function

21 January 2018

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The translation initiation factor eIF-4E binds to a common motif shared by the translation factor eIF-4 gamma and the translational repressors 4E-binding proteins

21 January 2018

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Cap-dependent translation initiation in eukaryotes is regulated by a molecular mimic of eIF4G

21 January 2018

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Ribosome loading onto the mRNA cap is driven by conformational coupling between eIF4G and eIF4E

21 January 2018

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Cap-free structure of eIF4E suggests a basis for conformational regulation by its ligands

21 January 2018

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Crystallization of eIF4E complexed with eIF4GI peptide and glycerol reveals distinct structural differences around the cap-binding site

21 January 2018

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Requirement of RNA binding of mammalian eukaryotic translation initiation factor 4GI (eIF4GI) for efficient interaction of eIF4E with the mRNA cap.

21 January 2018

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Upstream and downstream of mTOR

21 January 2018

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Defining the role of mTOR in cancer

21 January 2018

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The pharmacology of mTOR inhibition

21 January 2018

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TOR signaling in growth and metabolism

21 January 2018

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Regulation of 4E-BP1 phosphorylation: a novel two-step mechanism

21 January 2018

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Activated eIF4E-binding Protein Slows G1 Progression and Blocks Transformation by c-myc without Inhibiting Cell Growth

21 January 2018

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p53-dependent translational control of senescence and transformation via 4E-BPs.

21 January 2018

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mTOR, translation initiation and cancer

21 January 2018

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4E-binding protein 1, a cell signaling hallmark in breast cancer that correlates with pathologic grade and prognosis

21 January 2018

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Phosphoprotein pathway mapping: Akt/mammalian target of rapamycin activation is negatively associated with childhood rhabdomyosarcoma survival

21 January 2018

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Mitogen-activated protein kinases activate the serine/threonine kinases Mnk1 and Mnk2

21 January 2018

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MNK1, a new MAP kinase-activated protein kinase, isolated by a novel expression screening method for identifying protein kinase substrates

21 January 2018

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The phosphorylation of eukaryotic initiation factor eIF4E in response to phorbol esters, cell stresses, and cytokines is mediated by distinct MAP kinase pathways

21 January 2018

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The mitogen-activated protein kinase signal-integrating kinase Mnk2 is a eukaryotic initiation factor 4E kinase with high levels of basal activity in mammalian cells

21 January 2018

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Human eukaryotic translation initiation factor 4G (eIF4G) recruits mnk1 to phosphorylate eIF4E

21 January 2018

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Translational control of eukaryotic gene expression

21 January 2018

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Mnk2 and Mnk1 are essential for constitutive and inducible phosphorylation of eukaryotic initiation factor 4E but not for cell growth or development

21 January 2018

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Phosphorylation of the eukaryotic translation initiation factor eIF4E contributes to its transformation and mRNA transport activities

21 January 2018

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Phosphorylation of eukaryotic translation initiation factor 4E is critical for growth

21 January 2018

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Phosphorylation of eukaryotic initiation factor 4E markedly reduces its affinity for capped mRNA.

21 January 2018

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Phosphorylation of eIF4E by Mnk-1 enhances HSV-1 translation and replication in quiescent cells

21 January 2018

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Phosphorylation of eukaryotic initiation factor (eIF) 4E is not required for de novo protein synthesis following recovery from hypertonic stress in human kidney cells

21 January 2018

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Molecular cross-talk between MEK1/2 and mTOR signaling during recovery of 293 cells from hypertonic stress

21 January 2018

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Negative regulation of protein translation by mitogen-activated protein kinase-interacting kinases 1 and 2

21 January 2018

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21 January 2018

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The Myc/Max/Mad network and the transcriptional control of cell behavior

21 January 2018

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Induction of apoptosis in fibroblasts by c-myc protein

21 January 2018

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Role for c-myc in activation-induced apoptotic cell death in T cell hybridomas

21 January 2018

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Translational control of programmed cell death: eukaryotic translation initiation factor 4E blocks apoptosis in growth-factor-restricted fibroblasts with physiologically expressed or deregulated Myc.

21 January 2018

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An essential E box in the promoter of the gene encoding the mRNA cap-binding protein (eukaryotic initiation factor 4E) is a target for activation by c-myc

21 January 2018

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c-Myc and eIF4F are components of a feedforward loop that links transcription and translation

21 January 2018

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The transformation suppressor Pdcd4 is a novel eukaryotic translation initiation factor 4A binding protein that inhibits translation

21 January 2018

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Molecular mechanisms of mTOR-mediated translational control

21 January 2018

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c-Myc and eIF4F constitute a feedforward loop that regulates cell growth: implications for anticancer therapy

21 January 2018

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Maskin is a CPEB-associated factor that transiently interacts with elF-4E.

21 January 2018

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Drosophila cup is an eIF4E binding protein that associates with Bruno and regulates oskar mRNA translation in oogenesis

21 January 2018

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The proline-rich homeodomain protein, PRH, is a tissue-specific inhibitor of eIF4E-dependent cyclin D1 mRNA transport and growth

21 January 2018

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Eukaryotic translation initiation factor 4E activity is modulated by HOXA9 at multiple levels.

21 January 2018

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Emx2 homeodomain transcription factor interacts with eukaryotic translation initiation factor 4E (eIF4E) in the axons of olfactory sensory neurons

21 January 2018

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Regulation of cap-dependent translation by eIF4E inhibitory proteins

21 January 2018

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Bruno acts as a dual repressor of oskar translation, promoting mRNA oligomerization and formation of silencing particles

21 January 2018

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A new paradigm for translational control: inhibition via 5'-3' mRNA tethering by Bicoid and the eIF4E cognate 4EHP.

21 January 2018

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Cloning and characterization of 4EHP, a novel mammalian eIF4E-related cap-binding protein

21 January 2018

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Characterization of mammalian eIF4E-family members

21 January 2018

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RNA binding and translational suppression by bicoid

21 January 2018

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Cytoplasmic Prep1 interacts with 4EHP inhibiting Hoxb4 translation

21 January 2018

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Transcriptional repression of the eukaryotic initiation factor 4E gene by wild type p53.

21 January 2018

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hnRNP K binds a core polypyrimidine element in the eukaryotic translation initiation factor 4E (eIF4E) promoter, and its regulation of eIF4E contributes to neoplastic transformation

21 January 2018

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Ubiquitination and proteasome-dependent degradation of human eukaryotic translation initiation factor 4E.

21 January 2018

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Sumoylation of eIF4E activates mRNA translation

21 January 2018

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Internal ribosome entry sites in eukaryotic mRNA molecules

21 January 2018

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Identification of the genome-linked protein in virions of Potato virus A, with comparison to other members in genus Potyvirus.

21 January 2018

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Calicivirus translation initiation requires an interaction between VPg and eIF 4 E.

21 January 2018

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Host factors exploited by retroviruses

21 January 2018

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Reaction in alphavirus mRNA capping: formation of a covalent complex of nonstructural protein nsP1 with 7-methyl-GMP.

21 January 2018

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Regulation of viral transcription elongation and termination during vaccinia virus infection

21 January 2018

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Unconventional mechanism of mRNA capping by the RNA-dependent RNA polymerase of vesicular stomatitis virus.

21 January 2018

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Formation of guanosine(5')tetraphospho(5')adenosine cap structure by an unconventional mRNA capping enzyme of vesicular stomatitis virus.

21 January 2018

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Histidine-mediated RNA transfer to GDP for unique mRNA capping by vesicular stomatitis virus RNA polymerase

21 January 2018

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A unique cap(m7GpppXm)-dependent influenza virion endonuclease cleaves capped RNAs to generate the primers that initiate viral RNA transcription

21 January 2018

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The structural basis for cap binding by influenza virus polymerase subunit PB2

21 January 2018

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The cap-snatching endonuclease of influenza virus polymerase resides in the PA subunit

21 January 2018

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Activation of the translational suppressor 4E-BP1 following infection with encephalomyocarditis virus and poliovirus.

21 January 2018

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Human cytomegalovirus UL69 protein facilitates translation by associating with the mRNA cap-binding complex and excluding 4EBP1

21 January 2018

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Human cytomegalovirus protein UL38 inhibits host cell stress responses by antagonizing the tuberous sclerosis protein complex

21 January 2018

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RNA-binding of the human cytomegalovirus transactivator protein UL69, mediated by arginine-rich motifs, is not required for nuclear export of unspliced RNA.

21 January 2018

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The many roles of the regulatory protein ICP27 during herpes simplex virus infection

21 January 2018

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Proteomics of herpes simplex virus infected cell protein 27: association with translation initiation factors

21 January 2018

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RNA binding properties of bunyamwera virus nucleocapsid protein and selective binding to an element in the 5' terminus of the negative-sense S segment

21 January 2018

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A protein that replaces the entire cellular eIF4F complex

21 January 2018

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Bunyavirus N: eIF4F surrogate and cap-guardian.

21 January 2018

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Interaction of S-adenosylhomocysteine hydrolase of Xenopus laevis with mRNA(guanine-7-)methyltransferase: implication on its nuclear compartmentalisation and on cap methylation of hnRNA.

21 January 2018

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Cap methyltransferase selective binding and methylation of GpppG-RNA are stimulated by importin-alpha

21 January 2018

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Crossing the nuclear envelope: hierarchical regulation of nucleocytoplasmic transport

21 January 2018

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Specific regulation of mRNA cap methylation by the c-Myc and E2F1 transcription factors

21 January 2018

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The Myc transactivation domain promotes global phosphorylation of the RNA polymerase II carboxy-terminal domain independently of direct DNA binding

21 January 2018

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S-adenosyl homocysteine hydrolase is required for Myc-induced mRNA cap methylation, protein synthesis, and cell proliferation.

21 January 2018

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21 January 2018

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P bodies and the control of mRNA translation and degradation

21 January 2018

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Nonsense codons in human beta-globin mRNA result in the production of mRNA degradation products

21 January 2018

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Beta -Globin mRNA decay in erythroid cells: UG site-preferred endonucleolytic cleavage that is augmented by a premature termination codon

21 January 2018

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Identification of a cytoplasmic complex that adds a cap onto 5'-monophosphate RNA

21 January 2018

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Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe

21 January 2018

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Structural basis of m(7)GpppG binding to poly(A)-specific ribonuclease

21 January 2018

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The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition

21 January 2018

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Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

21 January 2018

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Enhanced mRNA cap methylation increases cyclin D1 expression and promotes cell transformation

21 January 2018

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mTOR signaling and drug development in cancer

21 January 2018

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Therapeutic suppression of translation initiation factor eIF4E expression reduces tumor growth without toxicity

21 January 2018

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Molecular targeting of the oncogene eIF4E in acute myeloid leukemia (AML): a proof-of-principle clinical trial with ribavirin.

21 January 2018

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Translational control of the innate immune response through IRF-7

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/WRNA.52

1 reference

25 August 2017

1 reference

PubMed ID

21957010