RNA viruses and the host microRNA machinery (Q38081701)

28 August 2017

title

RNA viruses and the host microRNA machinery (English)

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28 August 2017

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Benjamin R tenOever

1

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28 August 2017

language of work or name

English

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publication date

1 March 2013

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Nature Reviews Microbiology

28 August 2017

published in

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28 August 2017

volume

11

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28 August 2017

issue

3

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28 August 2017

page(s)

169-180

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RNA-guided genetic silencing systems in bacteria and archaea

28 August 2017

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Antiviral immunity in Drosophila requires systemic RNA interference spread

31 March 2020

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An extensive class of small RNAs in Caenorhabditis elegans

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An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans

31 March 2020

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Identification of novel genes coding for small expressed RNAs

31 March 2020

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Nuclear export of microRNA precursors

31 March 2020

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Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs

31 March 2020

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Role for a bidentate ribonuclease in the initiation step of RNA interference

31 March 2020

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Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing

31 March 2020

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Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans

31 March 2020

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A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA

31 March 2020

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Asymmetry in the assembly of the RNAi enzyme complex

31 March 2020

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Functional siRNAs and miRNAs Exhibit Strand Bias

31 March 2020

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Both natural and designed micro RNAs can inhibit the expression of cognate mRNAs when expressed in human cells

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

The impact of microRNAs on protein output

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Widespread changes in protein synthesis induced by microRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

MicroRNA targeting specificity in mammals: determinants beyond seed pairing

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Silencing of microRNAs in vivo with 'antagomirs'

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

31 March 2020

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MicroRNAs: target recognition and regulatory functions

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Expanding the microRNA targeting code: functional sites with centered pairing

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

An alternative mode of microRNA target recognition

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

RNA interference against viruses: strike and counterstrike

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Viruses and microRNAs: RISCy interactions with serious consequences

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Effects of Dicer and Argonaute down-regulation on mRNA levels in human HEK293 cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Endogenous microRNA can be broadly exploited to regulate transgene expression according to tissue, lineage and differentiation state

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

High-throughput assessment of microRNA activity and function using microRNA sensor and decoy libraries

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

In vivo delivery of cytoplasmic RNA virus-derived miRNAs

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Influenza A virus-generated small RNAs regulate the switch from transcription to replication

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

A mammalian microRNA expression atlas based on small RNA library sequencing

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Expression profiling reveals off-target gene regulation by RNAi

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Recognizing and avoiding siRNA off-target effects for target identification and therapeutic application

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Interferon modulation of cellular microRNAs as an antiviral mechanism

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Hypersusceptibility to vesicular stomatitis virus infection in Dicer1-deficient mice is due to impaired miR24 and miR93 expression

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Influenza A virus infection of human respiratory cells induces primary microRNA expression

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Kinetic analysis of the RNAi enzyme complex

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Identification of microRNAs of the herpesvirus family

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Identification of virus-encoded microRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Six RNA Viruses and Forty-One Hosts: Viral Small RNAs and Modulation of Small RNA Repertoires in Vertebrate and Invertebrate Systems

31 March 2020

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Positive and negative modulation of viral and cellular mRNAs by liver-specific microRNA miR-122.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Stabilization of hepatitis C virus RNA by an Ago2-miR-122 complex.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Position-dependent function for a tandem microRNA miR-122-binding site located in the hepatitis C virus RNA genome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Masking the 5' terminal nucleotides of the hepatitis C virus genome by an unconventional microRNA-target RNA complex.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Proteome half-life dynamics in living human cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

MicroRNA-155 is induced during the macrophage inflammatory response

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Murine cytomegalovirus encodes a miR-27 inhibitor disguised as a target

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Down-regulation of a host microRNA by a Herpesvirus saimiri noncoding RNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Degradation of cellular mir-27 by a novel, highly abundant viral transcript is important for efficient virus replication in vivo

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Herpesvirus microRNAs: phenotypes and functions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Degradation of host microRNAs by poxvirus poly(A) polymerase reveals terminal RNA methylation as a protective antiviral mechanism

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Competition for XPO5 binding between Dicer mRNA, pre-miRNA and viral RNA regulates human Dicer levels

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Adenovirus VA1 noncoding RNA can inhibit small interfering RNA and MicroRNA biogenesis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Suppression of gene silencing: a general strategy used by diverse DNA and RNA viruses of plants

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Interferon antagonist proteins of influenza and vaccinia viruses are suppressors of RNA silencing

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Human influenza virus NS1 protein enhances viral pathogenicity and acts as an RNA silencing suppressor in plants.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

The influenza A virus NS1 protein binds small interfering RNAs and suppresses RNA silencing in plants

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Hematopoietic-specific targeting of influenza A virus reveals replication requirements for induction of antiviral immune responses

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

MicroRNA-mediated species-specific attenuation of influenza A virus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Type 1 interferons and the virus-host relationship: a lesson in détente .

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Harnessing endogenous miRNAs to control virus tissue tropism as a strategy for developing attenuated virus vaccines

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Endogenous microRNA regulation suppresses transgene expression in hematopoietic lineages and enables stable gene transfer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

A novel assay for viral microRNA function identifies a single nucleotide polymorphism that affects Drosha processing

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Engineered lentiviral vector targeting astrocytes in vivo

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

MicroRNA targeting of neurotropic flavivirus: effective control of virus escape and reversion to neurovirulent phenotype

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Insertion of microRNA targets into the flavivirus genome alters its highly neurovirulent phenotype

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Attenuation of vesicular stomatitis virus encephalitis through microRNA targeting

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

A let-7 MicroRNA-sensitive vesicular stomatitis virus demonstrates tumor-specific replication

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

MicroRNA-sensitive oncolytic measles viruses for cancer-specific vector tropism

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Replication in cells of hematopoietic origin is necessary for Dengue virus dissemination

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Stable knockdown of microRNA in vivo by lentiviral vectors

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Target RNA-directed trimming and tailing of small silencing RNAs

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Long-term, efficient inhibition of microRNA function in mice using rAAV vectors

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells

31 March 2020

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Knocking down barriers: advances in siRNA delivery

31 March 2020

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RNA virus microRNA that mimics a B-cell oncomiR.

31 March 2020

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Merkel cell polyomavirus encodes a microRNA with the ability to autoregulate viral gene expression

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Combinatorial delivery of small interfering RNAs reduces RNAi efficacy by selective incorporation into RISC

31 March 2020

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Lessons from Nature: microRNA-based shRNA libraries

31 March 2020

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Second-generation shRNA libraries covering the mouse and human genomes

31 March 2020

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siRNA-mediated gene silencing in vitro and in vivo.

31 March 2020

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Inhibition of human immunodeficiency virus type 1 replication in primary macrophages by using Tat- or CCR5-specific small interfering RNAs expressed from a lentivirus vector

31 March 2020

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Lentivirus-delivered stable gene silencing by RNAi in primary cells

31 March 2020

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The promises and pitfalls of RNA-interference-based therapeutics

31 March 2020

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Fatality in mice due to oversaturation of cellular microRNA/short hairpin RNA pathways

31 March 2020

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Sequence- and target-independent angiogenesis suppression by siRNA via TLR3

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Activation of the interferon system by short-interfering RNAs

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Induction of an interferon response by RNAi vectors in mammalian cells

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2971

Interferon induction by siRNAs and ssRNAs synthesized by phage polymerase

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

5'-Triphosphate RNA is the ligand for RIG-I

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

RIG-I-mediated antiviral responses to single-stranded RNA bearing 5'-phosphates

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Differential roles of MDA5 and RIG-I helicases in the recognition of RNA viruses

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

A structural basis for discriminating between self and nonself double-stranded RNAs in mammalian cells.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Sequence-dependent stimulation of the mammalian innate immune response by synthetic siRNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Overexpression of exportin 5 enhances RNA interference mediated by short hairpin RNAs and microRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Argonaute proteins are key determinants of RNAi efficacy, toxicity, and persistence in the adult mouse liver

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Competition for RISC binding predicts in vitro potency of siRNA.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Reduced levels of Ago2 expression result in increased siRNA competition in mammalian cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Low-level shRNA cytotoxicity can contribute to MYC-induced hepatocellular carcinoma in adult mice

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Artificial miRNAs mitigate shRNA-mediated toxicity in the brain: implications for the therapeutic development of RNAi

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Artificial microRNAs as siRNA shuttles: improved safety as compared to shRNAs in vitro and in vivo

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Activation of innate immunity in nonhuman primates following intraportal administration of adenoviral vectors.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Effect of adenovirus-mediated RNA interference on endogenous microRNAs in a mouse model of multidrug resistance protein 2 gene silencing

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Transcription start regions in the human genome are favored targets for MLV integration

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Hematopoietic stem cell gene transfer in a tumor-prone mouse model uncovers low genotoxicity of lentiviral vector integration

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Small silencing RNAs: state-of-the-art

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Stable in vivo expression of the cystic fibrosis transmembrane conductance regulator with an adeno-associated virus vector

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Long-term gene expression and phenotypic correction using adeno-associated virus vectors in the mammalian brain

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Functional microRNA generated from a cytoplasmic RNA virus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Noncanonical cytoplasmic processing of viral microRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Evidence for a cytoplasmic microprocessor of pri-miRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Engineered RNA viral synthesis of microRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

West Nile virus encodes a microRNA-like small RNA in the 3' untranslated region which up-regulates GATA4 mRNA and facilitates virus replication in mosquito cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

HIV-1 can escape from RNA interference by evolving an alternative structure in its RNA genome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

31 March 2020

Oncolytic virotherapy

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Embryonic stem cell-specific microRNAs promote induced pluripotency

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

The widespread impact of mammalian MicroRNAs on mRNA repression and evolution

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Coherent but overlapping expression of microRNAs and their targets during vertebrate development

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

On the origin and functions of RNA-mediated silencing: from protists to man

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Length-dependent recognition of double-stranded ribonucleic acids by retinoic acid-inducible gene-I and melanoma differentiation-associated gene 5

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Potent effect of target structure on microRNA function.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Nucleotide sequence homology requirements of HIV-1-specific short hairpin RNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Functional identification of optimized RNAi triggers using a massively parallel sensor assay

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

The MicroRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2971

Harnessing endogenous miR-181a to segregate transgenic antigen receptor expression in developing versus post-thymic T cells in murine hematopoietic chimeras

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23411862

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Adeno-associated viral vector-mediated gene transfer of human blood coagulation factor IX into mouse liver

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23411862

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NRMICRO2971

1 reference

Dimensions Publication ID

28 August 2017

1015037470

0 references

1 reference