Novel types and sites of histone modifications emerge as players in the transcriptional regulation contest (Q38249060)

1 September 2017

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title

Novel types and sites of histone modifications emerge as players in the transcriptional regulation contest (English)

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1 September 2017

Sylvain Daujat

3

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author name string

Adam F Kebede

series ordinal

1

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1 September 2017

Robert Schneider

series ordinal

2

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1 September 2017

language of work or name

English

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publication date

7 October 2014

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1 September 2017

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1 September 2017

volume

282

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1 September 2017

issue

9

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1 September 2017

page(s)

1658-1674

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Crystal structure of the nucleosome core particle at 2.8 A resolution

1 September 2017

cites work

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Histone variants: key players of chromatin

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Histone variants: dynamic punctuation in transcription

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Targeting histone modifications--epigenetics in cancer

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Chromatin higher-order structures and gene regulation

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Mammalian epigenetic mechanisms

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Chromatin modifications and their function

21 January 2018

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Regulation of chromatin by histone modifications

21 January 2018

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21 January 2018

Decoding the nucleosome

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The language of covalent histone modifications

21 January 2018

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Application of mass spectrometry to the identification and quantification of histone post-translational modifications.

21 January 2018

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Histone proteomics and the epigenetic regulation of nucleosome mobility

21 January 2018

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Proteomic characterization of novel histone post-translational modifications

21 January 2018

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Translating the Histone Code

21 January 2018

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Perceiving the epigenetic landscape through histone readers.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone H4-K16 acetylation controls chromatin structure and protein interactions

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure

21 January 2018

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Use of selectively trypsinized nucleosome core particles to analyze the role of the histone "tails" in the stabilization of the nucleosome

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

The specificity and topology of chromatin interaction pathways in yeast

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Regulated nucleosome mobility and the histone code.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Scratching the (lateral) surface of chromatin regulation by histone modifications

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Dot1p modulates silencing in yeast by methylation of the nucleosome core

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Disruptor of telomeric silencing-1 is a chromatin-specific histone H3 methyltransferase.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Lysine methylation within the globular domain of histone H3 by Dot1 is important for telomeric silencing and Sir protein association

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

The tale beyond the tail: histone core domain modifications and the regulation of chromatin structure

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Conformational dynamics of the chromatin fiber in solution: determinants, mechanisms, and functions

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Sin mutations alter inherent nucleosome mobility

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Amino acid substitutions in the structured domains of histones H3 and H4 partially relieve the requirement of the yeast SWI/SNF complex for transcription

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Charge State of the Globular Histone Core Controls Stability of the Nucleosome

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Acetylation of histone H3 at the nucleosome dyad alters DNA-histone binding.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone fold modifications control nucleosome unwrapping and disassembly

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Chromatin dynamics: interplay between remodeling enzymes and histone modifications

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Spontaneous access to DNA target sites in folded chromatin fibers

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Rapid spontaneous accessibility of nucleosomal DNA.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Rtt109 is required for proper H3K56 acetylation: a chromatin mark associated with the elongating RNA polymerase II.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

CBP/p300-mediated acetylation of histone H3 on lysine 56

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Screen for DNA-damage-responsive histone modifications identifies H3K9Ac and H3K56Ac in human cells

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Yeast Rtt109 promotes genome stability by acetylating histone H3 on lysine 56

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

The Rtt109-Vps75 histone acetyltransferase complex acetylates non-nucleosomal histone H3

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Acetylation of histone H3 lysine 56 regulates replication-coupled nucleosome assembly

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Acetylated lysine 56 on histone H3 drives chromatin assembly after repair and signals for the completion of repair

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Acetylation in histone H3 globular domain regulates gene expression in yeast.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3 K56 acetylation and Asf1.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone deacetylase inhibitors globally enhance h3/h4 tail acetylation without affecting h3 lysine 56 acetylation

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone h3 lysine 56 acetylation is linked to the core transcriptional network in human embryonic stem cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

A method for genetically installing site-specific acetylation in recombinant histones defines the effects of H3 K56 acetylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone H3-K56 acetylation is catalyzed by histone chaperone-dependent complexes

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Cell cycle and checkpoint regulation of histone H3 K56 acetylation by Hst3 and Hst4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

The sirtuins hst3 and Hst4p preserve genome integrity by controlling histone h3 lysine 56 deacetylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Organismal differences in post-translational modifications in histones H3 and H4.

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Acetylation of histone H3 at lysine 64 regulates nucleosome dynamics and facilitates transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

DNA binding within the nucleosome core

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Partitioning and plasticity of repressive histone methylation states in mammalian chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Expression patterns and post-translational modifications associated with mammalian histone H3 variants

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

H3K64 trimethylation marks heterochromatin and is dynamically remodeled during developmental reprogramming.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Dissecting the role of H3K64me3 in mouse pericentromeric heterochromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone H3 lysine 56 methylation regulates DNA replication through its interaction with PCNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

H3K56me3 is a novel, conserved heterochromatic mark that largely but not completely overlaps with H3K9me3 in both regulation and localization

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

H3R42me2a is a histone modification with positive transcriptional effects

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone arginine methylation

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

JAK2 phosphorylates histone H3Y41 and excludes HP1alpha from chromatin

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

High-resolution dynamic mapping of histone-DNA interactions in a nucleosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Regulation of transcription through acetylation of H3K122 on the lateral surface of the histone octamer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Identification of novel histone post-translational modifications by peptide mass fingerprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Phosphorylation of histone H3(T118) alters nucleosome dynamics and remodeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Genomic characterization reveals a simple histone H4 acetylation code.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

The nucleosomal barrier to promoter escape by RNA polymerase II is overcome by the chromatin remodeler Chd1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Glutamine methylation in histone H2A is an RNA-polymerase-I-dedicated modification

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Methylation of proteins involved in translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

The role of FACT in making and breaking nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Catch me if you can: how the histone chaperone FACT capitalizes on nucleosome breathing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Towards a mechanism for histone chaperones

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone chaperones in nucleosome assembly and human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

ASF1 binds to a heterodimer of histones H3 and H4: a two-step mechanism for the assembly of the H3-H4 heterotetramer on DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Histone chaperones: an escort network regulating histone traffic

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Chaperoning histones during DNA replication and repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Phosphorylation of H4 Ser 47 promotes HIRA-mediated nucleosome assembly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

PP1α, PP1β and Wip-1 regulate H4S47 phosphorylation and deposition of histone H3 variant H3.3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Citrullination regulates pluripotency and histone H1 binding to chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Protein lysine acylation and cysteine succination by intermediates of energy metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Lysine propionylation and butyrylation are novel post-translational modifications in histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Identification and verification of lysine propionylation and butyrylation in yeast core histones using PTMap software

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Identification and characterization of propionylation at histone H3 lysine 23 in mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Lysine succinylation and lysine malonylation in histones.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Lysine glutarylation is a protein posttranslational modification regulated by SIRT5

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Lysine 2-hydroxyisobutyrylation is a widely distributed active histone mark

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

N-lysine propionylation controls the activity of propionyl-CoA synthetase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

The human histone acetyltransferase P/CAF is a promiscuous histone propionyltransferase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Identification of combinatorial patterns of post-translational modifications on individual histones in the mouse brain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Identification of lysine succinylation as a new post-translational modification

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

SIRT5-mediated lysine desuccinylation impacts diverse metabolic pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Lysine succinylation is a frequently occurring modification in prokaryotes and eukaryotes and extensively overlaps with acetylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Old enzymes, new tricks: sirtuins are NAD(+)-dependent de-acylases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Nonenzymatic protein acylation as a carbon stress regulated by sirtuin deacylases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Metabolic regulation of epigenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Connecting threads: epigenetics and metabolism

21 January 2018

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https://api.crossref.org/works/10.1111%2FFEBS.13047

Influence of metabolism on epigenetics and disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

The nexus of chromatin regulation and intermediary metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

Physiology. When metabolism and epigenetics converge.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

ATP-citrate lyase links cellular metabolism to histone acetylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FFEBS.13047

21 January 2018

Identifiers

DOI

10.1111/FEBS.13047

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1 September 2017

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