Functional RNA during Zika virus infection (Q40037886)

16 September 2017

Functional RNA during Zika virus infection (English)

1 reference

16 September 2017

0 references

Jelke J Fros

3

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Giel P. Göertz

object named as

Giel P Göertz

series ordinal

1

0 references

Gorben P. Pijlman

series ordinal

4

object named as

Gorben P Pijlman

1 reference

16 September 2017

Sandra R Abbo

2

1 reference

16 September 2017

29 August 2017

1 reference

16 September 2017

1 reference

PubMed ID

28864425

on focus list of Wikimedia project

16 September 2017

WikiProject Zika Corpus

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cites work

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Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome

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Functional analysis of dengue virus cyclization sequences located at the 5' and 3'UTRs

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Causes and implications of codon usage bias in RNA viruses

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7 January 2021

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DNA methylation and the frequency of CpG in animal DNA.

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Mosquito RNAi is the major innate immune pathway controlling arbovirus infection and transmission

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Functional binding of hexanucleotides to 3C protease of hepatitis A virus

7 January 2021

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7 January 2021

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Human DDX3 protein is a valuable target to develop broad spectrum antiviral agents

7 January 2021

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Functions of the 3' and 5' genome RNA regions of members of the genus Flavivirus

7 January 2021

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The long and short of antiviral defense: small RNA-based immunity in insects

7 January 2021

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Eukaryotic stress granules: the ins and outs of translation

7 January 2021

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7 January 2021

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Evolution of codon usage in Zika virus genomes is host and vector specific

7 January 2021

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Japanese encephalitis virus non-coding RNA inhibits activation of interferon by blocking nuclear translocation of interferon regulatory factor 3.

7 January 2021

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The Structural Basis of Pathogenic Subgenomic Flavivirus RNA (sfRNA) Production

7 January 2021

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RNA structures that resist degradation by Xrn1 produce a pathogenic Dengue virus RNA

7 January 2021

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Neurodevelopmental protein Musashi 1 interacts with the Zika genome and promotes viral replication

7 January 2021

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mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain

7 January 2021

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Higher catalytic efficiency of N-7-methylation is responsible for processive N-7 and 2'-O methyltransferase activity in dengue virus

7 January 2021

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Functional non-coding RNAs derived from the flavivirus 3' untranslated region.

7 January 2021

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A New Clade of Insect-Specific Flaviviruses from Australian Anopheles Mosquitoes Displays Species-Specific Host Restriction

7 January 2021

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Structures of NS5 Methyltransferase from Zika Virus

7 January 2021

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Molecular basis of base substitution hotspots in Escherichia coli

7 January 2021

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The Zika virus methyltransferase: structure and functions for drug design perspectives

7 January 2021

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A Detailed Comparative Analysis of Codon Usage Bias in Zika Virus

7 January 2021

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2'-O methylation of the viral mRNA cap evades host restriction by IFIT family members

7 January 2021

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Interaction between the Cellular Protein eEF1A and the 3'-Terminal Stem-Loop of West Nile Virus Genomic RNA Facilitates Viral Minus-Strand RNA Synthesis

7 January 2021

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Attenuation of tick-borne encephalitis virus using large-scale random codon re-encoding

7 January 2021

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Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq

7 January 2021

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Full Genome Sequence and sfRNA Interferon Antagonist Activity of Zika Virus from Recife, Brazil

7 January 2021

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Biochemical and genetic characterization of dengue virus methyltransferase

7 January 2021

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2'-O methylation of internal adenosine by flavivirus NS5 methyltransferase

7 January 2021

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Flavivirus RNA methylation

7 January 2021

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YTHDF2 destabilizes m(6)A-containing RNA through direct recruitment of the CCR4-NOT deadenylase complex

7 January 2021

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Mammalian mutation pressure, synonymous codon choice, and mRNA degradation

7 January 2021

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The crystal structure of Zika virus NS5 reveals conserved drug targets

7 January 2021

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An RNA cap (nucleoside-2'-O-)-methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization

7 January 2021

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P bodies: at the crossroads of post-transcriptional pathways

7 January 2021

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Molecular evolution of Zika virus during its emergence in the 20(th) century

7 January 2021

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Interferon-induced Ifit proteins: their role in viral pathogenesis

7 January 2021

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Functional Information Stored in the Conserved Structural RNA Domains of Flavivirus Genomes

7 January 2021

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A 5' RNA element promotes dengue virus RNA synthesis on a circular genome

7 January 2021

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Dengue virus genomic variation associated with mosquito adaptation defines the pattern of viral non-coding RNAs and fitness in human cells

7 January 2021

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Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

7 January 2021

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Zika Virus Genomic RNA Possesses Conserved G-Quadruplexes Characteristic of the Flaviviridae Family

7 January 2021

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Tissue Barriers to Arbovirus Infection in Mosquitoes

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Gene expression regulation mediated through reversible m⁶A RNA methylation

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

RNA structures required for production of subgenomic flavivirus RNA

7 January 2021

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Noncoding Subgenomic Flavivirus RNA Is Processed by the Mosquito RNA Interference Machinery and Determines West Nile Virus Transmission by Culex pipiens Mosquitoes

7 January 2021

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Zika virus disrupts molecular fingerprinting of human neurospheres

7 January 2021

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Zika virus: a previously slow pandemic spreads rapidly through the Americas

7 January 2021

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Elevation of CpG frequencies in influenza A genome attenuates pathogenicity but enhances host response to infection

7 January 2021

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RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts

7 January 2021

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Determinants of translation efficiency and accuracy

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Dengue Non-coding RNA: TRIMmed for Transmission

7 January 2021

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N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Origin and evolution of 3'UTR of flaviviruses: long direct repeats as a basis for the formation of secondary structures and their significance for virus transmission

7 January 2021

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RNomics: identification and function of small, non-messenger RNAs

7 January 2021

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Determination of the Cell Permissiveness Spectrum, Mode of RNA Replication, and RNA-Protein Interaction of Zika Virus

7 January 2021

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Methylated constituents of Aedes albopictus poly (A)-containing messenger RNA

7 January 2021

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Innate immune restriction and antagonism of viral RNA lacking 2׳-O methylation

7 January 2021

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The extent of codon usage bias in human RNA viruses and its evolutionary origin

7 January 2021

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Evolution of base composition and codon usage bias in the genus Flavivirus

7 January 2021

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The 5' → 3' exoribonuclease XRN1/Pacman and its functions in cellular processes and development

7 January 2021

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Precise localization of m6A in Rous sarcoma virus RNA reveals clustering of methylation sites: implications for RNA processing

7 January 2021

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A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation

7 January 2021

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Essential role of cyclization sequences in flavivirus RNA replication

7 January 2021

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Significance in Replication of the Terminal Nucleotides of the Flavivirus Genome

7 January 2021

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Mutational Pressure in Zika Virus: Local ADAR-Editing Areas Associated with Pauses in Translation and Replication

7 January 2021

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New hypotheses derived from the structure of a flaviviral Xrn1-resistant RNA: Conservation, folding, and host adaptation

7 January 2021

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Codon Pair Bias Is a Direct Consequence of Dinucleotide Bias

7 January 2021

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Cell proteins TIA-1 and TIAR interact with the 3' stem-loop of the West Nile virus complementary minus-strand RNA and facilitate virus replication

7 January 2021

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Rational design of a flavivirus vaccine by abolishing viral RNA 2'-O methylation

7 January 2021

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Cellular DDX3 regulates Japanese encephalitis virus replication by interacting with viral un-translated regions

7 January 2021

1 reference

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Dynamics of Human and Viral RNA Methylation during Zika Virus Infection

7 January 2021

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The yeast KEM1 gene encodes a nuclease specific for G4 tetraplex DNA: implication of in vivo functions for this novel DNA structure

7 January 2021

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Gene disruption of a G4-DNA-dependent nuclease in yeast leads to cellular senescence and telomere shortening

7 January 2021

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Viral RNA switch mediates the dynamic control of flavivirus replicase recruitment by genome cyclization

7 January 2021

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Circles reshaping the RNA world: from waste to treasure

7 January 2021

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Virus-host coevolution: common patterns of nucleotide motif usage in Flaviviridae and their hosts

7 January 2021

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G-quadruplexes in viruses: function and potential therapeutic applications

7 January 2021

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Dengue subgenomic RNA binds TRIM25 to inhibit interferon expression for epidemiological fitness

7 January 2021

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5'- and 3'-noncoding regions in flavivirus RNA.

7 January 2021

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Synonymous Virus Genome Recoding as a Tool to Impact Viral Fitness

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

5'-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons

7 January 2021

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PIWIs Go Viral: Arbovirus-Derived piRNAs in Vector Mosquitoes

7 January 2021

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Zika Virus Pathogenesis and Tissue Tropism

7 January 2021

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Bugs Are Not to Be Silenced: Small RNA Pathways and Antiviral Responses in Insects

7 January 2021

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A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

XRN1 stalling in the 5' UTR of Hepatitis C virus and Bovine Viral Diarrhea virus is associated with dysregulated host mRNA stability

7 January 2021

1 reference

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Flavivirus sfRNA suppresses antiviral RNA interference in cultured cells and mosquitoes and directly interacts with the RNAi machinery

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

A dynamic G-quadruplex region regulates the HIV-1 long terminal repeat promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

A Highly Structured, Nuclease-Resistant, Noncoding RNA Produced by Flaviviruses Is Required for Pathogenicity

7 January 2021

1 reference

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RNA editing by the host ADAR system affects the molecular evolution of the Zika virus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Poly(A)-binding protein binds to the non-polyadenylated 3' untranslated region of dengue virus and modulates translation efficiency

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Interferons and viruses: an interplay between induction, signalling, antiviral responses and virus countermeasures

7 January 2021

1 reference

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West Nile Virus 5'-Cap Structure Is Formed by Sequential Guanine N-7 and Ribose 2'-O Methylations by Nonstructural Protein 5

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Dinucleotide and stop codon frequencies in single-stranded RNA viruses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Noncoding subgenomic flavivirus RNA: multiple functions in West Nile virus pathogenesis and modulation of host responses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Neuronal Interferon Signaling Is Required for Protection against Herpes Simplex Virus Replication and Pathogenesis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Doublet frequency analysis of fractionated vertebrate nuclear DNA.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

West Nile virus noncoding subgenomic RNA contributes to viral evasion of the type I interferon-mediated antiviral response

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

A live-attenuated Zika virus vaccine candidate induces sterilizing immunity in mouse models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

HIV-1 nucleocapsid protein increases strand transfer recombination by promoting dimeric G-quartet formation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Large-scale recoding of an arbovirus genome to rebalance its insect versus mammalian preference

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Identification of multiple RIG-I-specific pathogen associated molecular patterns within the West Nile virus genome and antigenome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

An RNA pseudoknot is required for production of yellow fever virus subgenomic RNA by the host nuclease XRN1

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Modelling mutational and selection pressures on dinucleotides in eukaryotic phyla--selection against CpG and UpA in cytoplasmically expressed RNA and in RNA viruses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

A determinant of Sindbis virus neurovirulence enables efficient disruption of Jak/STAT signaling.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

A detailed analysis of codon usage patterns and influencing factors in Zika virus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

The methylation of adenovirus-specific nuclear and cytoplasmic RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Structural Insight into NS5 of Zika Virus Leading to the Discovery of MTase Inhibitors

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

An exoribonuclease from saccharomyces cerevisiae: Effect of modifications of 5′ end groups on the hydrolysis of substrates to 5′ mononucleotides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

2'-O methylation of the viral mRNA cap by West Nile virus evades ifit1-dependent and -independent mechanisms of host restriction in vivo

7 January 2021

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RNA viruses and the host microRNA machinery

7 January 2021

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Identification and developmental expression of a 5'-3' exoribonuclease from Drosophila melanogaster.

7 January 2021

1 reference

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Human papillomavirus G-quadruplexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

RNA virus attenuation by codon pair deoptimisation is an artefact of increases in CpG/UpA dinucleotide frequencies.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Nucleotide composition of the Zika virus RNA genome and its codon usage

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Dengue virus RNA structure specialization facilitates host adaptation

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

RNA Structure Duplications and Flavivirus Host Adaptation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

The structure of Zika virus NS5 reveals a conserved domain conformation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3' UTR structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Zika virus: History, emergence, biology, and prospects for control

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Single-stranded DNA aptamer that specifically binds to the influenza virus NS1 protein suppresses interferon antagonism.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Rational design of a live attenuated dengue vaccine: 2'-o-methyltransferase mutants are highly attenuated and immunogenic in mice and macaques

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

West Nile virus genome cyclization and RNA replication require two pairs of long-distance RNA interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Structure and function of the Zika virus full-length NS5 protein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Structure and Function of Flavivirus NS5 Methyltransferase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Comparative genomic analysis of pre-epidemic and epidemic Zika virus strains for virological factors potentially associated with the rapidly expanding epidemic

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Why is CpG suppressed in the genomes of virtually all small eukaryotic viruses but not in those of large eukaryotic viruses?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

Influenza viral mRNA contains internal N6-methyladenosine and 5'-terminal 7-methylguanosine in cap structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2017.08.015

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/J.VIRUSRES.2017.08.015

1 reference

release_uxwze3c7pbe3vpq2stwsh543ea

16 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/uxwze3c7pbe3vpq2stwsh543ea

mapped directly with Wikidata item

24 November 2022

based on heuristic

PubMed ID

28864425

1 reference

PubMed ID

28864425