Conformational dynamics of helix S6 from Shaker potassium channel: simulation studies. (Q44068943)

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11 November 2019

title

Conformational dynamics of helix S6 from Shaker potassium channel: simulation studies (English)

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4

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author name string

Joanne N Bright

series ordinal

1

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Indira H Shrivastava

series ordinal

2

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Frank S Cordes

series ordinal

3

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publication date

1 September 2002

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11 November 2019

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volume

64

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issue

6

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page(s)

303-313

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Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms

11 November 2019

cites work

1 reference

Do transmembrane protein superfolds exist?

21 January 2018

1 reference

Statistical analysis of predicted transmembrane alpha-helices.

21 January 2018

1 reference

Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins

21 January 2018

1 reference

Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule

21 January 2018

1 reference

A model recognition approach to the prediction of all-helical membrane protein structure and topology

21 January 2018

1 reference

kPROT: a knowledge-based scale for the propensity of residue orientation in transmembrane segments. Application to membrane protein structure prediction.

21 January 2018

1 reference

Helix packing in polytopic membrane proteins: role of glycine in transmembrane helix association

21 January 2018

1 reference

Internal packing of helical membrane proteins

21 January 2018

1 reference

Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.

21 January 2018

1 reference

Hypothesis about the function of membrane-buried proline residues in transport proteins

21 January 2018

1 reference

Helix geometry in proteins

21 January 2018

1 reference

Proline kinks in transmembrane alpha-helices

21 January 2018

1 reference

Amino acid distributions in integral membrane protein structures

21 January 2018

1 reference

Proline residues in transmembrane helices: structural or dynamic role?

21 January 2018

1 reference

Proline in alpha-helix: stability and conformation studied by dynamics simulation

21 January 2018

1 reference

Hinges, swivels and switches: the role of prolines in signalling via transmembrane alpha-helices

21 January 2018

1 reference

The TXP motif in the second transmembrane helix of CCR5. A structural determinant of chemokine-induced activation

21 January 2018

1 reference

The Structure of the Potassium Channel: Molecular Basis of K+ Conduction and Selectivity

21 January 2018

1 reference

Ion conduction pore is conserved among potassium channels

21 January 2018

1 reference

Modeling of the structure of bacteriorhodopsin. A molecular dynamics study

21 January 2018

1 reference

Transmembrane helix structure, dynamics, and interactions: multi-nanosecond molecular dynamics simulations

21 January 2018

1 reference

Molecular dynamics of individual alpha-helices of bacteriorhodopsin in dimyristol phosphatidylocholine. I. Structure and dynamics

21 January 2018

1 reference

Structure and dynamics of an amphiphilic peptide in a lipid bilayer: a molecular dynamics study

21 January 2018

1 reference

Alamethicin helices in a bilayer and in solution: molecular dynamics simulations

21 January 2018

1 reference

Defining the transmembrane helix of M2 protein from influenza A by molecular dynamics simulations in a lipid bilayer

21 January 2018

1 reference

Interactions of alpha-helices with lipid bilayers: a review of simulation studies

21 January 2018

1 reference

Membrane simulations: bigger and better?

21 January 2018

1 reference

Structure and dynamics of K channel pore-lining helices: a comparative simulation study

21 January 2018

1 reference

Proline-induced hinges in transmembrane helices: possible roles in ion channel gating

21 January 2018

1 reference

Prediction of transmembrane segments in proteins utilising multiple sequence alignments

21 January 2018

1 reference

Prediction of membrane protein topology utilizing multiple sequence alignments.

21 January 2018

1 reference

Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: the dense alignment surface method

21 January 2018

1 reference

Transmembrane helices predicted at 95% accuracy

21 January 2018

1 reference

Parallel helix bundles and ion channels: molecular modeling via simulated annealing and restrained molecular dynamics

21 January 2018

1 reference

Voltage-dependent insertion of alamethicin at phospholipid/water and octane/water interfaces

21 January 2018

1 reference

GROMACS: A message-passing parallel molecular dynamics implementation

21 January 2018

1 reference

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

1 reference

Raster3D: photorealistic molecular graphics

21 January 2018

1 reference

HELANAL: a program to characterize helix geometry in proteins.

21 January 2018

1 reference

General method for calculating helical parameters of polymer chains from bond lengths, bond angles, and internal-rotation angles

21 January 2018

1 reference

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

Principles that determine the structure of proteins

21 January 2018

1 reference

Prokink: a protocol for numerical evaluation of helix distortions by proline.

21 January 2018

1 reference

Geometrical and sequence characteristics of alpha-helices in globular proteins

21 January 2018

1 reference

Amino acid composition of the membrane and aqueous domains of integral membrane proteins

21 January 2018

1 reference

Molecular dynamics with coupling to an external bath

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1002/BIP.10197

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11 November 2019

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